RNA–Protein interactions for RNA: ENST00000530749.5

RDX-211, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 2,558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-211ENST00000530749 QARSP47897 775 aaKnown RBP23.69■■□□□ 1.38
RDX-211ENST00000530749 NPEPPSP55786 919 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 GHRHRQ02643 423 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 CASP8Q14790 479 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 HDXQ7Z353 690 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 RNF10Q8N5U6 811 aaKnown RBP23.69■■□□□ 1.38
RDX-211ENST00000530749 SPATA4Q8NEY3 305 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 PXMP2Q9NR77 195 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 ZNF541Q9H0D2 1346 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 LRRIQ3A6PVS8 624 aaPredicted RBP23.69■■□□□ 1.38
RDX-211ENST00000530749 EXOC3O60645 756 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 LRRN2O75325 713 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 HMGCS2P54868 508 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 DLG4P78352 724 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 BAATQ14032 418 aaPredicted RBP23.69■■□□□ 1.38
RDX-211ENST00000530749 RPGRIP1Q96KN7 1286 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 FRMD4BQ9Y2L6 1034 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 TELO2Q9Y4R8 837 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 PARP14Q460N5 1801 aa23.69■■□□□ 1.38
RDX-211ENST00000530749 TULP1O00294 542 aaPredicted RBP23.68■■□□□ 1.38
RDX-211ENST00000530749 BACH1O14867 736 aa23.68■■□□□ 1.38
RDX-211ENST00000530749 ZBED4O75132 1171 aa23.68■■□□□ 1.38
RDX-211ENST00000530749 YWHABP31946 246 aaKnown RBP23.68■■□□□ 1.38
RDX-211ENST00000530749 ANGEL2Q5VTE6 544 aaKnown RBP23.68■■□□□ 1.38
RDX-211ENST00000530749 ZNF771Q7L3S4 317 aaPredicted RBP23.68■■□□□ 1.38
RDX-211ENST00000530749 NIPA1Q7RTP0 329 aa23.68■■□□□ 1.38
RDX-211ENST00000530749 NEK9Q8TD19 979 aa23.68■■□□□ 1.38
RDX-211ENST00000530749 LRRC1Q9BTT6 524 aa23.68■■□□□ 1.38
RDX-211ENST00000530749 RNF146Q9NTX7 359 aa23.68■■□□□ 1.38
RDX-211ENST00000530749 NAGPAQ9UK23 515 aa23.68■■□□□ 1.38
RDX-211ENST00000530749 ZHX1Q9UKY1 873 aaPredicted RBP23.68■■□□□ 1.38
RDX-211ENST00000530749 LOXHD1Q8IVV2 1947 aa23.68■■□□□ 1.38
RDX-211ENST00000530749 PPP1R12BO60237 982 aaPredicted RBP23.68■■□□□ 1.38
RDX-211ENST00000530749 TCP1P17987 556 aaKnown RBP23.68■■□□□ 1.38
RDX-211ENST00000530749 ARHGEF16Q5VV41 709 aa23.68■■□□□ 1.38
RDX-211ENST00000530749 PRLRP16471 622 aa23.67■■□□□ 1.38
RDX-211ENST00000530749 BACE1P56817 501 aa23.67■■□□□ 1.38
RDX-211ENST00000530749 SLC7A5Q01650 507 aa23.67■■□□□ 1.38
RDX-211ENST00000530749 NFIL3Q16649 462 aa23.67■■□□□ 1.38
RDX-211ENST00000530749 STXBP4Q6ZWJ1 553 aa23.67■■□□□ 1.38
RDX-211ENST00000530749 CBWD1Q9BRT8 395 aa23.67■■□□□ 1.38
RDX-211ENST00000530749 LUC7LQ9NQ29 371 aaKnown RBP23.67■■□□□ 1.38
RDX-211ENST00000530749 DMGDHQ9UI17 866 aaKnown RBP23.67■■□□□ 1.38
RDX-211ENST00000530749 DOCK1Q14185 1865 aa23.67■■□□□ 1.38
RDX-211ENST00000530749 GRID2IPA4D2P6 1211 aa23.67■■□□□ 1.38
RDX-211ENST00000530749 SORBS3O60504 671 aa23.67■■□□□ 1.38
RDX-211ENST00000530749 CCDC181Q5TID7 509 aa23.67■■□□□ 1.38
RDX-211ENST00000530749 ALKBH5Q6P6C2 394 aaKnown RBP23.67■■□□□ 1.38
RDX-211ENST00000530749 MKNK1Q9BUB5 465 aa23.67■■□□□ 1.38
RDX-211ENST00000530749 UBE4BO95155 1302 aa23.67■■□□□ 1.38
RDX-211ENST00000530749 PTPRAP18433 802 aa23.66■■□□□ 1.38
RDX-211ENST00000530749 RNASE9P60153 205 aaKnown RBP23.66■■□□□ 1.38
RDX-211ENST00000530749 SCYL3Q8IZE3 742 aa23.66■■□□□ 1.38
RDX-211ENST00000530749 TXLNBQ8N3L3 684 aa23.66■■□□□ 1.38
RDX-211ENST00000530749 LARSQ9P2J5 1176 aaKnown RBP23.66■■□□□ 1.38
RDX-211ENST00000530749 GTPBP10A4D1E9 387 aaKnown RBP23.66■■□□□ 1.38
RDX-211ENST00000530749 PRKG1Q13976 671 aa23.66■■□□□ 1.38
RDX-211ENST00000530749 DOCK5Q9H7D0 1870 aa23.66■■□□□ 1.38
RDX-211ENST00000530749 EVI5O60447 810 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 PRKCIP41743 596 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 BFSP1Q12934 665 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 SNRNP48Q6IEG0 339 aaKnown RBP23.65■■□□□ 1.38
RDX-211ENST00000530749 TRPM4Q8TD43 1214 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 CCDC43Q96MW1 224 aaKnown RBP23.65■■□□□ 1.38
RDX-211ENST00000530749 PLEKHA4Q9H4M7 779 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 RBM12Q9NTZ6 932 aaKnown RBP23.65■■□□□ 1.38
RDX-211ENST00000530749 DNAJC12Q9UKB3 198 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 PCDHGC5Q9Y5F6 944 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 FZD9O00144 591 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 DDX3XO00571 662 aaKnown RBP eCLIP23.65■■□□□ 1.387e-9■■■□□ 18.1
RDX-211ENST00000530749 SLC16A4O15374 487 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 PEX3P56589 373 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 SOX10P56693 466 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 ZNF280CQ8ND82 737 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 KIFC3Q9BVG8 833 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.65■■□□□ 1.386e-7■■□□□ 12.2
RDX-211ENST00000530749 TBC1D22BQ9NU19 505 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 DBR1Q9UK59 544 aaKnown RBP23.65■■□□□ 1.38
RDX-211ENST00000530749 FBXL5Q9UKA1 691 aa23.65■■□□□ 1.38
RDX-211ENST00000530749 TNNT3P45378 269 aaPredicted RBP23.64■■□□□ 1.38
RDX-211ENST00000530749 SP4Q02446 784 aa23.64■■□□□ 1.38
RDX-211ENST00000530749 DRAP1Q14919 205 aaPredicted RBP23.64■■□□□ 1.38
RDX-211ENST00000530749 MTFR1LQ9H019 292 aa23.64■■□□□ 1.38
RDX-211ENST00000530749 INTS2Q9H0H0 1204 aaKnown RBP23.64■■□□□ 1.38
RDX-211ENST00000530749 PRDM4Q9UKN5 801 aa23.64■■□□□ 1.38
RDX-211ENST00000530749 RLFQ13129 1914 aa23.64■■□□□ 1.38
RDX-211ENST00000530749 F8VZ95 297 aa23.64■■□□□ 1.37
RDX-211ENST00000530749 PLS3P13797 630 aa23.64■■□□□ 1.37
RDX-211ENST00000530749 MYL7Q01449 175 aa23.64■■□□□ 1.37
RDX-211ENST00000530749 ARHGAP44Q17R89 818 aa23.64■■□□□ 1.37
RDX-211ENST00000530749 DLK2Q6UY11 383 aa23.64■■□□□ 1.37
RDX-211ENST00000530749 OLIG1Q8TAK6 271 aa23.64■■□□□ 1.37
RDX-211ENST00000530749 GPR88Q9GZN0 384 aa23.64■■□□□ 1.37
RDX-211ENST00000530749 TCEAL9Q9UHQ7 104 aa23.64■■□□□ 1.37
RDX-211ENST00000530749 TARSL2A2RTX5 802 aaKnown RBP23.63■■□□□ 1.37
RDX-211ENST00000530749 NOP2P46087 812 aaKnown RBP23.63■■□□□ 1.37
RDX-211ENST00000530749 XKR9Q5GH70 373 aa23.63■■□□□ 1.37
RDX-211ENST00000530749 ZNF572Q7Z3I7 529 aaPredicted RBP23.63■■□□□ 1.37
RDX-211ENST00000530749 HAUS6Q7Z4H7 955 aa23.63■■□□□ 1.37
RDX-211ENST00000530749 MMGT1Q8N4V1 131 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms