RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 ARHGEF35A5YM69 484 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 RRN3P2A6NIE6 340 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 M0QZ92 97 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 PSMD10O75832 226 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 GJB5O95377 273 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 KRT18P05783 430 aaKnown RBP5.33□□□□□ -1.56
SSBP3-213ENST00000530618 MYL1P05976 194 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 ARP10275 920 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 XRCC6P12956 609 aaKnown RBP eCLIP5.33□□□□□ -1.56
SSBP3-213ENST00000530618 SELPP16109 830 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 KCNA2P16389 499 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 CMA1P23946 247 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 RPA1P27694 616 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 TMOD1P28289 359 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 MARCKSP29966 332 aaPredicted RBP5.33□□□□□ -1.56
SSBP3-213ENST00000530618 TCF7P36402 384 aaPredicted RBP5.33□□□□□ -1.56
SSBP3-213ENST00000530618 SYKP43405 635 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 DNM2P50570 870 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 STAT5BP51692 787 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 ACTR2P61160 394 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 ERVK-21P61565 698 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 CDC42EP1Q00587 391 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 HSP90AA2PQ14568 343 aaPredicted RBP5.33□□□□□ -1.56
SSBP3-213ENST00000530618 FAM47CQ5HY64 1035 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 ZNF618Q5T7W0 954 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 CNKSR3Q6P9H4 555 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.33□□□□□ -1.56
SSBP3-213ENST00000530618 CLEC17AQ6ZS10 378 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 STXBP4Q6ZWJ1 553 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 PLPPR4Q7Z2D5 763 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 RSPH3Q86UC2 560 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 SERINC5Q86VE9 423 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 CCDC155Q8N6L0 562 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 TMEM87AQ8NBN3 555 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 SLC7A3Q8WY07 619 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 ARNTL2Q8WYA1 636 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 ZFP91Q96JP5 570 aaPredicted RBP5.33□□□□□ -1.56
SSBP3-213ENST00000530618 MTMR9Q96QG7 549 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 NACC1Q96RE7 527 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 POLR3CQ9BUI4 534 aaPredicted RBP5.33□□□□□ -1.56
SSBP3-213ENST00000530618 CCSER1Q9C0I3 900 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 EPHX3Q9H6B9 360 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 SUGCTQ9HAC7 445 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 RC3H2Q9HBD1 1191 aaKnown RBP5.33□□□□□ -1.56
SSBP3-213ENST00000530618 TRPC6Q9Y210 931 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 NOD1Q9Y239 953 aa5.33□□□□□ -1.56
SSBP3-213ENST00000530618 COL1A2P08123 1366 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.32□□□□□ -1.56
SSBP3-213ENST00000530618 POTEB3A0JP26 581 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 FAM205CA6NFA0 338 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 H0YCG3 227 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 MAGEB2O15479 319 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 HBP1O60381 514 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 DTNBO60941 627 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 TBCAO75347 108 aaKnown RBP5.32□□□□□ -1.56
SSBP3-213ENST00000530618 LETM1O95202 739 aaPredicted RBP5.32□□□□□ -1.56
SSBP3-213ENST00000530618 KIF20AO95235 890 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 SMC2O95347 1197 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 SCP2P22307 547 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 RFC5P40937 340 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 TOB1P50616 345 aaPredicted RBP5.32□□□□□ -1.56
SSBP3-213ENST00000530618 POLGP54098 1239 aaPredicted RBP5.32□□□□□ -1.56
SSBP3-213ENST00000530618 PTK7Q13308 1070 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 BFSP2Q13515 415 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 NBR1Q14596 966 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 MFSD10Q14728 455 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 PTPAQ15257 358 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 KIAA0753Q2KHM9 967 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 PLEKHG4Q58EX7 1191 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 XKR3Q5GH77 459 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 EARS2Q5JPH6 523 aaKnown RBP5.32□□□□□ -1.56
SSBP3-213ENST00000530618 ODR4Q5SWX8 454 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 UTP14CQ5TAP6 766 aaKnown RBP5.32□□□□□ -1.56
SSBP3-213ENST00000530618 FAM173BQ6P4H8 233 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 POTEBQ6S5H4 581 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 SV2BQ7L1I2 683 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 TPH2Q8IWU9 490 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 C4orf19Q8IY42 314 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 MICALL1Q8N3F8 863 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 C7orf31Q8N865 590 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 IGSF22Q8N9C0 903 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 FSIP1Q8NA03 581 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 CNNM3Q8NE01 707 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 MCPH1Q8NEM0 835 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 CYP2W1Q8TAV3 490 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 TCP11Q8WWU5 503 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 BBXQ8WY36 941 aaPredicted RBP5.32□□□□□ -1.56
SSBP3-213ENST00000530618 HAS1Q92839 578 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 LENG9Q96B70 501 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 DRC1Q96MC2 740 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 GPR20Q99678 358 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 EIF2AK1Q9BQI3 630 aaKnown RBP5.32□□□□□ -1.56
SSBP3-213ENST00000530618 LXNQ9BS40 222 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 C17orf80Q9BSJ5 609 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 LRFN3Q9BTN0 628 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 CSRNP2Q9H175 543 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 UNC45AQ9H3U1 944 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 ANKEF1Q9NU02 776 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 DDX19AQ9NUU7 478 aaKnown RBP5.32□□□□□ -1.56
SSBP3-213ENST00000530618 RMND1Q9NWS8 449 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms