RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 MCOLN1Q9GZU1 580 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 DHX33Q9H6R0 707 aaKnown RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 PARVGQ9HBI0 331 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 A0A1W2PQ45 241 aaPredicted RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 A0A1W2PQY0 241 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 KBTBD13C9JR72 458 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 HAS3O00219 553 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 MAFO75444 373 aaPredicted RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 LETM1O95202 739 aaPredicted RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 MYL1P05976 194 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 KLRC1P26715 233 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 RFC5P40937 340 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 PEX3P56589 373 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 NLRP12P59046 1061 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 ZNF484Q5JVG2 852 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 FAM26FQ5R3K3 315 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 ODR4Q5SWX8 454 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 MARCH8Q5T0T0 291 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 L1TD1Q5T7N2 865 aaKnown RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 EFCAB12Q6NXP0 572 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 MTHFD1LQ6UB35 978 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 RUFY4Q6ZNE9 571 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 KIAA0895Q8NCT3 520 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 RNF214Q8ND24 703 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 MCPH1Q8NEM0 835 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 U2AF1L4Q8WU68 220 aaKnown RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 CCDC47Q96A33 483 aaKnown RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 GSDMAQ96QA5 445 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 TSPY26PQ9H489 355 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 MRPL44Q9H9J2 332 aaKnown RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 RMND1Q9NWS8 449 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 FRMD3A2A2Y4 597 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 CCDC169A6NNP5 214 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 K7ENM7 598 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 TREHO43280 583 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 RHOBTB3O94955 611 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 VTNP04004 478 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 MYBP10242 640 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 PKN2Q16513 984 aaKnown RBP11.78□□□□□ -0.52
SOX6-213ENST00000530378 ZC2HC1CQ53FD0 456 aaPredicted RBP11.78□□□□□ -0.52
SOX6-213ENST00000530378 GAS2L3Q86XJ1 694 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 DIS3LQ8TF46 1054 aaKnown RBP11.78□□□□□ -0.52
SOX6-213ENST00000530378 ARMC5Q96C12 935 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 PDLIM7Q9NR12 457 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 KCND2Q9NZV8 630 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 ODF2LQ9ULJ1 636 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 CTNND2Q9UQB3 1225 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 COL4A3BPQ9Y5P4 624 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 GRIN2DO15399 1336 aa11.78□□□□□ -0.52
SOX6-213ENST00000530378 PVALEFA0A1B0GWK0 134 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 C17orf102A2RUQ5 167 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 LRRIQ4A6NIV6 560 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 SLC16A4O15374 487 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 KPNA6O60684 536 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 GCNT3O95395 438 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 TFRCP02786 760 aaKnown RBP11.77□□□□□ -0.52
SOX6-213ENST00000530378 GLRA2P23416 452 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 STX17P56962 302 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 ZNF445P59923 1031 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 NKX3-2P78367 333 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 KCNB1Q14721 858 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 ZNF658Q5TYW1 1059 aaPredicted RBP11.77□□□□□ -0.52
SOX6-213ENST00000530378 GDF6Q6KF10 455 aaPredicted RBP11.77□□□□□ -0.52
SOX6-213ENST00000530378 CNNM4Q6P4Q7 775 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 NFRKBQ6P4R8 1299 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 RHPN2Q8IUC4 686 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 NELFCDQ8IXH7 590 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 FAM178BQ8IXR5 827 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 ARRDC4Q8NCT1 418 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 PRPF31Q8WWY3 499 aaKnown RBP11.77□□□□□ -0.52
SOX6-213ENST00000530378 DRC1Q96MC2 740 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 NLRP4Q96MN2 994 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 IKZF4Q9H2S9 585 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 STARD7Q9NQZ5 370 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 ANO10Q9NW15 660 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 SUCLA2Q9P2R7 463 aaPredicted RBP11.77□□□□□ -0.52
SOX6-213ENST00000530378 AKT3Q9Y243 479 aa11.77□□□□□ -0.52
SOX6-213ENST00000530378 ADGRA3Q8IWK6 1321 aa11.77□□□□□ -0.53
SOX6-213ENST00000530378 COL1A2P08123 1366 aa11.77□□□□□ -0.53
SOX6-213ENST00000530378 PRPF6O94906 941 aaKnown RBP11.76□□□□□ -0.53
SOX6-213ENST00000530378 SRGAP2CP0DJJ0 459 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 CYP2C9P11712 490 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 PLS3P13797 630 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 GAP43P17677 238 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 ZNF131P52739 623 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
SOX6-213ENST00000530378 EHHADHQ08426 723 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 DMP1Q13316 513 aaPredicted RBP11.76□□□□□ -0.53
SOX6-213ENST00000530378 ITGA7Q13683 1181 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 KIFAP3Q92845 792 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 GLT1D1Q96MS3 346 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 TRMT13Q9NUP7 481 aaKnown RBP11.76□□□□□ -0.53
SOX6-213ENST00000530378 GINS2Q9Y248 185 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 USP20Q9Y2K6 914 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 NRCAMQ92823 1304 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 SIP14410 1827 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 TRIM49BA6NDI0 452 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 MOXD2PA6NHM9 499 aa11.76□□□□□ -0.53
SOX6-213ENST00000530378 PRCPP42785 496 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms