RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 DEFB103AP81534 67 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 GRB10Q13322 594 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 ZRSR1Q15695 479 aaKnown RBP9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 SPECC1Q5M775 1068 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 HYIQ5T013 277 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 USP49Q70CQ1 688 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 TMCO2Q7Z6W1 182 aaPredicted RBP9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 RTN4RL1Q86UN2 441 aaPredicted RBP9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 CABP7Q86V35 215 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 RHPN2Q8IUC4 686 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 EXOC8Q8IYI6 725 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 USP38Q8NB14 1042 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 LINC00301Q8NCQ3 95 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 PRPF31Q8WWY3 499 aaKnown RBP9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 SEPT8Q92599 483 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 EPSTI1Q96J88 318 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 CHAMP1Q96JM3 812 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 AK8Q96MA6 479 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 ZNF396Q96N95 335 aaPredicted RBP9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 MTRQ99707 1265 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 JPH2Q9BR39 696 aaPredicted RBP9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 CSRNP2Q9H175 543 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 MTIF3Q9H2K0 278 aaKnown RBP9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 PADI3Q9ULW8 664 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 SRPRBQ9Y5M8 271 aaKnown RBP9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 SLC4A7Q9Y6M7 1214 aa9.67□□□□□ -0.86
UBASH3B-205ENST00000529998 A0A087WZ62 844 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 CSDE1O75534 798 aaKnown RBP9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 RPS6KA5O75582 802 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 DGAT1O75907 488 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 EYA4O95677 639 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 DDIT3P35638 169 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 ARL2P36404 184 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 PBX2P40425 430 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 UBA7P41226 1012 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 RABGGTBP53611 331 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 DNM1Q05193 864 aaKnown RBP9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 LAMTOR4Q0VGL1 99 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 NFX1Q12986 1120 aaKnown RBP9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 PAK2Q13177 524 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 STK38Q15208 465 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 PADI6Q6TGC4 694 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 MAEAQ7L5Y9 396 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 FAM228AQ86W67 206 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 LRRC15Q8TF66 581 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 NLRP7Q8WX94 980 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 PSPC1Q8WXF1 523 aaKnown RBP9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 APBB2Q92870 758 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 CCDC43Q96MW1 224 aaKnown RBP9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 FDXACB1Q9BRP7 624 aaPredicted RBP9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 BHMT2Q9H2M3 363 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 TMX1Q9H3N1 280 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 ATP6V0A4Q9HBG4 840 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 IFT122Q9HBG6 1241 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 POLD4Q9HCU8 107 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 ERVK-5Q9HDB9 667 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 GPRC5CQ9NQ84 441 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 ST3GAL5Q9UNP4 418 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 DNM3Q9UQ16 869 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 COL4A3BPQ9Y5P4 624 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 MORC2Q9Y6X9 1032 aaPredicted RBP9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 MYH11P35749 1972 aa9.66□□□□□ -0.86
UBASH3B-205ENST00000529998 TTC3P53804 2025 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 CHD9Q3L8U1 2897 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 ARHGEF35A5YM69 484 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 ENPP3O14638 875 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 SPTLC2O15270 562 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 GAS2O43903 313 aaKnown RBP9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 MGEA5O60502 916 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 YEATS4O95619 227 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 SRGAP2CP0DJJ0 459 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 DARSP14868 501 aaKnown RBP9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 ATP2A2P16615 1042 aaKnown RBP9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 CYP11B2P19099 503 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 FGFR4P22455 802 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 EIF4BP23588 611 aaKnown RBP9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 KCNJ6P48051 423 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 SMAD3P84022 425 aaKnown RBP9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 CDC42EP1Q00587 391 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 KARSQ15046 597 aaKnown RBP9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 TMEM119Q4V9L6 283 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 ZNF710Q8N1W2 664 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 KRI1Q8N9T8 703 aaKnown RBP9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 ASAP3Q8TDY4 903 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 TCP11Q8WWU5 503 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 LINC01599Q8WXQ3 324 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 SYMPKQ92797 1274 aaKnown RBP9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 NLRP4Q96MN2 994 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 SCLT1Q96NL6 688 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 CCSER1Q9C0I3 900 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 NT5C3AQ9H0P0 336 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 PLSCR2Q9NRY7 297 aa9.65□□□□□ -0.86
UBASH3B-205ENST00000529998 GPR182O15218 404 aa9.64□□□□□ -0.87
UBASH3B-205ENST00000529998 ASAP2O43150 1006 aa9.64□□□□□ -0.87
UBASH3B-205ENST00000529998 SLC26A4O43511 780 aa9.64□□□□□ -0.87
UBASH3B-205ENST00000529998 EFCAB14O75071 495 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms