RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 CDC42EP1Q00587 391 aa17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 EMC2Q15006 297 aa17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 FAM173BQ6P4H8 233 aa17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 FAM43BQ6ZT52 329 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 KSR1Q8IVT5 923 aa17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 PRPF31Q8WWY3 499 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 TMEM143Q96AN5 459 aa17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 FAM161BQ96MY7 647 aa17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 NACC1Q96RE7 527 aa17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 RAD9AQ99638 391 aa17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 FTHL17Q9BXU8 183 aa17.99■□□□□ 0.47
TSPAN4-218ENST00000529566 LCHNA4D1U4 455 aa17.98■□□□□ 0.47
TSPAN4-218ENST00000529566 TLL1O43897 1013 aa17.98■□□□□ 0.47
TSPAN4-218ENST00000529566 CA3P07451 260 aa17.98■□□□□ 0.47
TSPAN4-218ENST00000529566 CCT6AP40227 531 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-218ENST00000529566 HTRA4P83105 476 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-218ENST00000529566 SF3A1Q15459 793 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-218ENST00000529566 RHPN2Q8IUC4 686 aa17.98■□□□□ 0.47
TSPAN4-218ENST00000529566 MYOCDQ8IZQ8 938 aa17.98■□□□□ 0.47
TSPAN4-218ENST00000529566 RAB34Q9BZG1 259 aa17.98■□□□□ 0.47
TSPAN4-218ENST00000529566 IFT122Q9HBG6 1241 aa17.98■□□□□ 0.47
TSPAN4-218ENST00000529566 BMP2KQ9NSY1 1161 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-218ENST00000529566 TTC3P53804 2025 aa17.98■□□□□ 0.47
TSPAN4-218ENST00000529566 A0A087WZ62 844 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 GPR182O15218 404 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 GAS2O43903 313 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 CSDE1O75534 798 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 DGAT1O75907 488 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 NFX1Q12986 1120 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 DSC3Q14574 896 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 GRIN2CQ14957 1233 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 PTPAQ15257 358 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 HAUS3Q68CZ6 603 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 FAM117BQ6P1L5 589 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 ZNF410Q86VK4 478 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 NLRP7Q8WX94 980 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 FDXACB1Q9BRP7 624 aaPredicted RBP17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 ZSCAN16Q9H4T2 348 aaPredicted RBP17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 COL4A3BPQ9Y5P4 624 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 CLIC4Q9Y696 253 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 STK24Q9Y6E0 443 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 ARID2Q68CP9 1835 aa17.97■□□□□ 0.47
TSPAN4-218ENST00000529566 VWA3AA6NCI4 1184 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 BMP15O95972 392 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 ARL2P36404 184 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 TAP1Q03518 808 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 LAMTOR4Q0VGL1 99 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 SP7Q8TDD2 431 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 SNX29Q8TEQ0 813 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 TCP11Q8WWU5 503 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 PSPC1Q8WXF1 523 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 CDX2Q99626 313 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 MTRQ99707 1265 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 ZBED2Q9BTP6 218 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 SLC28A3Q9HAS3 691 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 ATP6V0A4Q9HBG4 840 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 RGS18Q9NS28 235 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 KIAA1024Q9UPX6 916 aa17.96■□□□□ 0.47
TSPAN4-218ENST00000529566 UPP2O95045 317 aa17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 FGFR4P22455 802 aa17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 FAM189BP81408 668 aa17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 GRIN1Q05586 938 aa17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 ODR4Q5SWX8 454 aa17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 HYIQ5T013 277 aa17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 KRT79Q5XKE5 535 aa17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 SPRED2Q7Z698 418 aa17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 SPRYD3Q8NCJ5 442 aa17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 ASAP3Q8TDY4 903 aa17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 ADAM2Q99965 735 aa17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 GCOM2Q9BZD3 368 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 RC3H2Q9HBD1 1191 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 DDX19AQ9NUU7 478 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 INSL6Q9Y581 213 aa17.95■□□□□ 0.46
TSPAN4-218ENST00000529566 C9IYK1 514 aa17.94■□□□□ 0.46
TSPAN4-218ENST00000529566 ASAP2O43150 1006 aa17.94■□□□□ 0.46
TSPAN4-218ENST00000529566 HSP90AA1P07900 732 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-218ENST00000529566 PPP2R2DQ66LE6 453 aa17.94■□□□□ 0.46
TSPAN4-218ENST00000529566 PADI6Q6TGC4 694 aa17.94■□□□□ 0.46
TSPAN4-218ENST00000529566 KCNK18Q7Z418 384 aa17.94■□□□□ 0.46
TSPAN4-218ENST00000529566 NLRP4Q96MN2 994 aa17.94■□□□□ 0.46
TSPAN4-218ENST00000529566 SCLT1Q96NL6 688 aa17.94■□□□□ 0.46
TSPAN4-218ENST00000529566 PNMA5Q96PV4 448 aa17.94■□□□□ 0.46
TSPAN4-218ENST00000529566 MINDY3Q9H8M7 445 aa17.94■□□□□ 0.46
TSPAN4-218ENST00000529566 COL6A3P12111 3177 aa17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 MYO9BQ13459 2157 aa17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 LINC01553A4QN01 128 aa17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 E9PMD0 336 aa17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 USO1O60763 962 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 SRGAP2CP0DJJ0 459 aa17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 PDIA4P13667 645 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 CYP11B2P19099 503 aa17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 GLRA2P23416 452 aa17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 SARSP49591 514 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 POU5F1BQ06416 359 aa17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 GRB10Q13322 594 aa17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 PKP1Q13835 747 aa17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 MXD4Q14582 209 aaPredicted RBP17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 SLC24A5Q71RS6 500 aa17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 ZNF689Q96CS4 500 aaPredicted RBP17.93■□□□□ 0.46
TSPAN4-218ENST00000529566 AK8Q96MA6 479 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms