RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 TEX2Q8IWB9 1127 aa7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 SUGP1Q8IWZ8 645 aaKnown RBP7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 MRPS27Q92552 414 aaKnown RBP7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 CASD1Q96PB1 797 aa7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 NEK1Q96PY6 1258 aa7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 LRRC2Q9BYS8 371 aa7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 ANO3Q9BYT9 981 aa7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 ELAC1Q9H777 363 aaKnown RBP7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 ANO2Q9NQ90 1003 aa7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 RNF19AQ9NV58 838 aa7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 TMEM161AQ9NX61 479 aa7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 TMEM260Q9NX78 707 aa7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 GINS2Q9Y248 185 aa7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 LZTS1Q9Y250 596 aa7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 COL1A2P08123 1366 aa7.04□□□□□ -1.28
CHRNA6-202ENST00000529467 CNTNAP5Q8WYK1 1306 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 FSD2A1L4K1 749 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 DENND3A2RUS2 1198 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 SMCO2A6NFE2 343 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 HIDE1A8MVS5 230 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 FAM86B1E9PN63 330 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 K7ELQ4 463 aaPredicted RBP7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 DDX39AO00148 427 aaKnown RBP7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 HMGB1P09429 215 aaKnown RBP7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 FAM86B2P0C5J1 330 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 FGFR1P11362 822 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 LAG3P18627 525 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 SREBF1P36956 1147 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 TECP42680 631 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 CRYBB1P53674 252 aaPredicted RBP7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 NAPAP54920 295 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 EXOSC10Q01780 885 aaKnown RBP7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 APOBRQ0VD83 1088 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 PTPN21Q16825 1174 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 KIZQ2M2Z5 673 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 FAM160B1Q5W0V3 765 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 CREB3L3Q68CJ9 461 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 SWSAP1Q6NVH7 229 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 NIPA1Q7RTP0 329 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 PLA2G4DQ86XP0 818 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 THNSL1Q8IYQ7 743 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 ZNF710Q8N1W2 664 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 CRYGNQ8WXF5 182 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 SNX27Q96L92 541 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 RIPOR3Q96MK2 946 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 OSMRQ99650 979 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 TMEM117Q9H0C3 514 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 ATP6V0A4Q9HBG4 840 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 NGRNQ9NPE2 291 aaKnown RBP7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 ZNF302Q9NR11 478 aa7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 MAFBQ9Y5Q3 323 aaPredicted RBP7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 V9GY48 417 aaPredicted RBP7.03□□□□□ -1.28
CHRNA6-202ENST00000529467 PLXNA3P51805 1871 aa7.02□□□□□ -1.28
CHRNA6-202ENST00000529467 IGLV3-22A0A075B6J6 115 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 hCG_1984214I3L0E3 225 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 BACH1O14867 736 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 C22orf31O95567 290 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 PDGFBP01127 241 aaPredicted RBP7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 VTNP04004 478 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 CYP3A4P08684 503 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 HOXB8P17481 243 aaPredicted RBP7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 ZNF76P36508 570 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 ADCY7P51828 1080 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 AP3B2Q13367 1082 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 ANKRD1Q15327 319 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 PLPP4Q5VZY2 271 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 PPP1R18Q6NYC8 613 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 MIS18BP1Q6P0N0 1132 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 PDXDC2PQ6P474 469 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 APOA5Q6Q788 366 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 KCNT2Q6UVM3 1135 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 SYNE3Q6ZMZ3 975 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 MICU3Q86XE3 530 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 FBXL16Q8N461 479 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 LINC01465Q8N7H1 131 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 ZNF713Q8N859 430 aaPredicted RBP7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 BBXQ8WY36 941 aaPredicted RBP7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 INTS4Q96HW7 963 aaKnown RBP7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 PPP1R16BQ96T49 567 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 TCF25Q9BQ70 676 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 APOL5Q9BWW9 433 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 IRF2BPLQ9H1B7 796 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 ADAMTS10Q9H324 1103 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 FAM217BQ9NTX9 383 aaPredicted RBP7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 FAM86C1Q9NVL1 165 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 RBM28Q9NW13 759 aaKnown RBP7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 BARHL2Q9NY43 387 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 PUF60Q9UHX1 559 aaKnown RBP7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 BRPF3Q9ULD4 1205 aa7.02□□□□□ -1.29
CHRNA6-202ENST00000529467 PTPRZ1P23471 2315 aaPredicted RBP7.01□□□□□ -1.29
CHRNA6-202ENST00000529467 C2orf71A6NGG8 1288 aa7.01□□□□□ -1.29
CHRNA6-202ENST00000529467 H0Y858 1186 aa7.01□□□□□ -1.29
CHRNA6-202ENST00000529467 IPO5O00410 1097 aaKnown RBP7.01□□□□□ -1.29
CHRNA6-202ENST00000529467 ADAMTS3O15072 1205 aa7.01□□□□□ -1.29
CHRNA6-202ENST00000529467 MAGEB2O15479 319 aa7.01□□□□□ -1.29
CHRNA6-202ENST00000529467 HOXA2O43364 376 aa7.01□□□□□ -1.29
CHRNA6-202ENST00000529467 SRGAP2BP0DMP2 458 aa7.01□□□□□ -1.29
CHRNA6-202ENST00000529467 ZSCAN20P17040 1043 aaPredicted RBP7.01□□□□□ -1.29
CHRNA6-202ENST00000529467 EIF4BP23588 611 aaKnown RBP7.01□□□□□ -1.29
CHRNA6-202ENST00000529467 CDC27P30260 824 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms