RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	VN1R3	Q9BXE9	311 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	BCO2	Q9BYV7	579 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	VAT1L	Q9HCJ6	419 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	WDR6	Q9NNW5	1121 aa	Known RBP	13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	TOMM22	Q9NS69	142 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	SEMA4G	Q9NTN9	838 aa		13.57	□□□□□ -0.24
PSMD13-209	ENST00000529372	SMIM35	A0A1B0GVV1	85 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372		M0QZ92	97 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	HMMR	O75330	724 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	RPS6KA5	O75582	802 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	STAM2	O75886	525 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	KCNA2	P16389	499 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	GBP2	P32456	591 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	CLCN4	P51793	760 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	RING1	Q06587	406 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	ALX1	Q15699	326 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	LPAL2	Q16609	132 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	SLC35G1	Q2M3R5	365 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	FAM228A	Q86W67	206 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	PNMA1	Q8ND90	353 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	CMAS	Q8NFW8	434 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	RPP25	Q9BUL9	199 aa	Known RBP	13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	RHOBTB2	Q9BYZ6	727 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	OSBPL6	Q9BZF3	934 aa		13.56	□□□□□ -0.24
PSMD13-209	ENST00000529372	SDK1	Q7Z5N4	2213 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	SRRM3	A6NNA2	597 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	TAF4	O00268	1085 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	PAPLN	O95428	1278 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	RET	P07949	1114 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	CA8	P35219	290 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	METAP2	P50579	478 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	BCAR1	P56945	870 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	PLCB4	Q15147	1175 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	CSRP2	Q16527	193 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	ASPRV1	Q53RT3	343 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	LAIR1	Q6GTX8	287 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	DGKH	Q86XP1	1220 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	NME8	Q8N427	588 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	PANK1	Q8TE04	598 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	SEPT1	Q8WYJ6	367 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	DDX1	Q92499	740 aa	Known RBP	13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	CLDN23	Q96B33	292 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	LRRCC1	Q9C099	1032 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	WASF3	Q9UPY6	502 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	CLUH	O75153	1309 aa		13.55	□□□□□ -0.24
PSMD13-209	ENST00000529372	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	LILRB3	O75022	631 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	POLR2M	P0CAP2	368 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	LAMP2	P13473	410 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	POLG	P54098	1239 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	GPC5	P78333	572 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	FZD5	Q13467	585 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	SNW1	Q13573	536 aa	Known RBP	13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	STAG2	Q8N3U4	1231 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	BBX	Q8WY36	941 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	KLHL5	Q96PQ7	755 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	ZKSCAN3	Q9BRR0	538 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	SMARCAD1	Q9H4L7	1026 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	LHX6	Q9UPM6	363 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	NUMBL	Q9Y6R0	609 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	MYH15	Q9Y2K3	1946 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	RALGAPA1	Q6GYQ0	2036 aa		13.54	□□□□□ -0.24
PSMD13-209	ENST00000529372	CELSR3	Q9NYQ7	3312 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	HOXA2	O43364	376 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	FGA	P02671	866 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	CNP	P09543	421 aa	Known RBP	13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	GIT2	Q14161	759 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	MTHFD1L	Q6UB35	978 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	DDX53	Q86TM3	631 aa	Known RBP	13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	PPFIBP1	Q86W92	1011 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	TBC1D10C	Q8IV04	446 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	KIAA0319L	Q8IZA0	1049 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	ZNF707	Q96C28	371 aa	Predicted RBP	13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	TMEM169	Q96HH4	297 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	SHD	Q96IW2	340 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	LTB4R2	Q9NPC1	389 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	ZBTB40	Q9NUA8	1239 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	GINS2	Q9Y248	185 aa		13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.53	□□□□□ -0.24
PSMD13-209	ENST00000529372	DOCK6	Q96HP0	2047 aa		13.52	□□□□□ -0.24
PSMD13-209	ENST00000529372	SHISA7	A6NL88	538 aa		13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	FAM170B	A6NMN3	283 aa		13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	CYSRT1	A8MQ03	144 aa		13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	ZBTB5	O15062	677 aa		13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	GPR182	O15218	404 aa		13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	DHX16	O60231	1041 aa	Known RBP	13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	CD72	P21854	359 aa		13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	MAGEA9	P43362	315 aa		13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	LIMK1	P53667	647 aa		13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	MLF2	Q15773	248 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	ZNF598	Q86UK7	904 aa	Known RBP	13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	ECHDC2	Q86YB7	292 aa		13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	IGSF21	Q96ID5	467 aa		13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	NEDD4	P46934	1319 aa		13.52	□□□□□ -0.25
PSMD13-209	ENST00000529372	NCL	P19338	710 aa	Known RBP	13.51	□□□□□ -0.25
PSMD13-209	ENST00000529372	TARS	P26639	723 aa	Known RBP	13.51	□□□□□ -0.25
PSMD13-209	ENST00000529372	HAND2	P61296	217 aa		13.51	□□□□□ -0.25
PSMD13-209	ENST00000529372	PRKCQ	Q04759	706 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms