RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 MCM8Q9UJA3 840 aa6.45□□□□□ -1.38
CTR9-204ENST00000529355 A0A0A6YYK5 440 aaPredicted RBP6.44□□□□□ -1.38
CTR9-204ENST00000529355 A0A0G2JNJ9 132 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 GOLGA8AA7E2F4 631 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 GOLGA8BA8MQT2 603 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 H2AFYO75367 372 aaKnown RBP6.44□□□□□ -1.38
CTR9-204ENST00000529355 ULK1O75385 1050 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 CHGBP05060 677 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 SESN3P58005 492 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 EIF4HQ15056 248 aaKnown RBP6.44□□□□□ -1.38
CTR9-204ENST00000529355 PITRM1Q5JRX3 1037 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 FAM26FQ5R3K3 315 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 ESPNLQ6ZVH7 1005 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 CXXC5Q7LFL8 322 aaKnown RBP6.44□□□□□ -1.38
CTR9-204ENST00000529355 FERMT3Q86UX7 667 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 OR5AN1Q8NGI8 311 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 WDR48Q8TAF3 677 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 STAG1Q8WVM7 1258 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 E2F7Q96AV8 911 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 AJUBAQ96IF1 538 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 LCORQ96JN0 433 aaPredicted RBP6.44□□□□□ -1.38
CTR9-204ENST00000529355 SOX7Q9BT81 388 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 Q9UFV3 132 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 ADAM29Q9UKF5 820 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 USP18Q9UMW8 372 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 MYPNQ86TC9 1320 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 WASHC2CQ9Y4E1 1318 aa6.44□□□□□ -1.38
CTR9-204ENST00000529355 PRICKLE3O43900 615 aaPredicted RBP6.43□□□□□ -1.38
CTR9-204ENST00000529355 B4GALT4O60513 344 aa6.43□□□□□ -1.38
CTR9-204ENST00000529355 PFKMP08237 780 aa6.43□□□□□ -1.38
CTR9-204ENST00000529355 CPEP16870 476 aa6.43□□□□□ -1.38
CTR9-204ENST00000529355 TIGD7Q6NT04 549 aaPredicted RBP6.43□□□□□ -1.38
CTR9-204ENST00000529355 SIAH1Q8IUQ4 282 aa6.43□□□□□ -1.38
CTR9-204ENST00000529355 KBTBD2Q8IY47 623 aa6.43□□□□□ -1.38
CTR9-204ENST00000529355 CBARPQ8N350 705 aaPredicted RBP6.43□□□□□ -1.38
CTR9-204ENST00000529355 LMBR1Q8WVP7 490 aa6.43□□□□□ -1.38
CTR9-204ENST00000529355 AHCYL2Q96HN2 611 aaKnown RBP6.43□□□□□ -1.38
CTR9-204ENST00000529355 SCYL1Q96KG9 808 aa6.43□□□□□ -1.38
CTR9-204ENST00000529355 TMX1Q9H3N1 280 aa6.43□□□□□ -1.38
CTR9-204ENST00000529355 ZCCHC4Q9H5U6 513 aa6.43□□□□□ -1.38
CTR9-204ENST00000529355 DNAI1Q9UI46 699 aa6.43□□□□□ -1.38
CTR9-204ENST00000529355 NOP58Q9Y2X3 529 aaKnown RBP6.43□□□□□ -1.38
CTR9-204ENST00000529355 A0A0A6YYJ9 748 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 OPHN1O60890 802 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 HMGCRP04035 888 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 HNRNPLP14866 589 aaKnown RBP eCLIP6.42□□□□□ -1.38
CTR9-204ENST00000529355 IARSP41252 1262 aaKnown RBP6.42□□□□□ -1.38
CTR9-204ENST00000529355 GPR3P46089 330 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 ADAM15Q13444 863 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 PCOLCEQ15113 449 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 TRIM68Q6AZZ1 485 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 SLC41A1Q8IVJ1 513 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 KLHL36Q8N4N3 616 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 FERMT2Q96AC1 680 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 C20orf173Q96LM9 149 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 PITHD1Q9GZP4 211 aaPredicted RBP6.42□□□□□ -1.38
CTR9-204ENST00000529355 PARD6AQ9NPB6 346 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.42□□□□□ -1.38
CTR9-204ENST00000529355 TRHDEQ9UKU6 1024 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 DENND2AQ9ULE3 1009 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 INVSQ9Y283 1065 aa6.42□□□□□ -1.38
CTR9-204ENST00000529355 hCG_2014768A0A024R1R8 64 aa6.41□□□□□ -1.38
CTR9-204ENST00000529355 INHBBP09529 407 aa6.41□□□□□ -1.38
CTR9-204ENST00000529355 ETV4P43268 484 aa6.41□□□□□ -1.38
CTR9-204ENST00000529355 GJA9P57773 515 aa6.41□□□□□ -1.38
CTR9-204ENST00000529355 ITKQ08881 620 aa6.41□□□□□ -1.38
CTR9-204ENST00000529355 RNF151Q2KHN1 245 aa6.41□□□□□ -1.38
CTR9-204ENST00000529355 BRDTQ58F21 947 aaPredicted RBP6.41□□□□□ -1.38
CTR9-204ENST00000529355 GAREM2Q75VX8 874 aa6.41□□□□□ -1.38
CTR9-204ENST00000529355 MTMR8Q96EF0 704 aa6.41□□□□□ -1.38
CTR9-204ENST00000529355 FDXACB1Q9BRP7 624 aaPredicted RBP6.41□□□□□ -1.38
CTR9-204ENST00000529355 NOL10Q9BSC4 688 aaKnown RBP6.41□□□□□ -1.38
CTR9-204ENST00000529355 QRSL1Q9H0R6 528 aaKnown RBP6.41□□□□□ -1.38
CTR9-204ENST00000529355 BARX1Q9HBU1 254 aaPredicted RBP6.41□□□□□ -1.38
CTR9-204ENST00000529355 KCMF1Q9P0J7 381 aa6.41□□□□□ -1.38
CTR9-204ENST00000529355 USP36Q9P275 1121 aaKnown RBP6.41□□□□□ -1.38
CTR9-204ENST00000529355 A0A0G2JLL6 359 aaPredicted RBP6.4□□□□□ -1.38
CTR9-204ENST00000529355 C2orf78A6NCI8 922 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 C9orf118A6NHY6 69 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 GABRDO14764 452 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 MT-CO1P00395 513 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 HOXA5P20719 270 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 CNR2P34972 360 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 MRE11P49959 708 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 LGALS4P56470 323 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 BCAR1P56945 870 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 CCT2P78371 535 aaKnown RBP6.4□□□□□ -1.38
CTR9-204ENST00000529355 DGKDQ16760 1214 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 ABCB5Q2M3G0 1257 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 INAVAQ3KP66 663 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 SP8Q8IXZ3 490 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 ZCRB1Q8TBF4 217 aaKnown RBP6.4□□□□□ -1.38
CTR9-204ENST00000529355 NKD2Q969F2 451 aaPredicted RBP6.4□□□□□ -1.38
CTR9-204ENST00000529355 DYDC2Q96IM9 177 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 SLC2A13Q96QE2 648 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 CARD11Q9BXL7 1154 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 BRINP2Q9C0B6 783 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 HAPLN2Q9GZV7 340 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 KCTD10Q9H3F6 313 aa6.4□□□□□ -1.38
CTR9-204ENST00000529355 USP40Q9NVE5 1235 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms