RNA–Protein interactions for RNA: ENST00000529088.1

LINC02553-201, Transcript of long intergenic non-protein coding RNA 2553, humanhuman

TSL 5 BASIC

Gene LINC02553, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02553-201ENST00000529088 PFKPQ01813 784 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 PAN2Q504Q3 1202 aaKnown RBP6.32□□□□□ -1.4
LINC02553-201ENST00000529088 MIIPQ5JXC2 388 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 AGBL4Q5VU57 503 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 SMC5Q8IY18 1101 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 CHFRQ96EP1 664 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 NEIL1Q96FI4 390 aaPredicted RBP6.32□□□□□ -1.4
LINC02553-201ENST00000529088 CCDC140Q96MF4 163 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 KCNJ15Q99712 375 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 CHMP4BQ9H444 224 aaKnown RBP6.32□□□□□ -1.4
LINC02553-201ENST00000529088 KCND1Q9NSA2 647 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 ACTR10Q9NZ32 417 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 CHMP5Q9NZZ3 219 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 RRP7AQ9Y3A4 280 aaKnown RBP6.32□□□□□ -1.4
LINC02553-201ENST00000529088 MON2Q7Z3U7 1717 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 ATP7BP35670 1465 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 PTCH1Q13635 1447 aa6.32□□□□□ -1.4
LINC02553-201ENST00000529088 PNPLA6Q8IY17 1366 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 ITSN1Q15811 1721 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 CD163L1Q9NR16 1453 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 NKRFO15226 690 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC02553-201ENST00000529088 IPO8O15397 1037 aaKnown RBP6.31□□□□□ -1.4
LINC02553-201ENST00000529088 MAFKO60675 156 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 EIF5BO60841 1220 aaKnown RBP6.31□□□□□ -1.4
LINC02553-201ENST00000529088 U2AF1L5P0DN76 240 aaPredicted RBP6.31□□□□□ -1.4
LINC02553-201ENST00000529088 FAHP16930 419 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 PTMSP20962 102 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 U2AF1Q01081 240 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC02553-201ENST00000529088 ALDH1L2Q3SY69 923 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 CD276Q5ZPR3 534 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 TTLL11Q8NHH1 800 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 IKZF4Q9H2S9 585 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 SMC4Q9NTJ3 1288 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 POGKQ9P215 609 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 RIMBP3CA6NJZ7 1639 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 RIMBP3BA6NNM3 1639 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 RIMBP3Q9UFD9 1639 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 FAM135BQ49AJ0 1406 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 AKAP12Q02952 1782 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 NRKQ7Z2Y5 1582 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 PIK3R4Q99570 1358 aa6.31□□□□□ -1.4
LINC02553-201ENST00000529088 CDK12Q9NYV4 1490 aaPredicted RBP6.3□□□□□ -1.4
LINC02553-201ENST00000529088 ALKQ9UM73 1620 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 FSD2A1L4K1 749 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 NARSO43776 548 aaKnown RBP6.3□□□□□ -1.4
LINC02553-201ENST00000529088 CAPNS1P04632 268 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 TRIM27P14373 513 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 COMTP21964 271 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 TMPOP42166 694 aaKnown RBP6.3□□□□□ -1.4
LINC02553-201ENST00000529088 RRADP55042 308 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 PPP2R2AP63151 447 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 RNF151Q2KHN1 245 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 ATF7IPQ6VMQ6 1270 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 USP53Q70EK8 1073 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 OTOP3Q7RTS5 596 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 HSCBQ8IWL3 235 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 TRIM48Q8IWZ4 208 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 IFNL2Q8IZJ0 200 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 SNX21Q969T3 373 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 PLEKHF1Q96S99 279 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 DPYSL5Q9BPU6 564 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 IER2Q9BTL4 223 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 PHF20Q9BVI0 1012 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 C22orf23Q9BZE7 217 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 KATNBL1Q9H079 304 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 SLKQ9H2G2 1235 aaPredicted RBP6.3□□□□□ -1.4
LINC02553-201ENST00000529088 TERF2IPQ9NYB0 399 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 STRIP2Q9ULQ0 834 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 ARHGEF40Q8TER5 1519 aa6.3□□□□□ -1.4
LINC02553-201ENST00000529088 GOLGA6L3A6NEY3 463 aa6.29□□□□□ -1.4
LINC02553-201ENST00000529088 C1SP09871 688 aa6.29□□□□□ -1.4
LINC02553-201ENST00000529088 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
LINC02553-201ENST00000529088 ACO1P21399 889 aaKnown RBP6.29□□□□□ -1.4
LINC02553-201ENST00000529088 RBM25P49756 843 aaKnown RBP6.29□□□□□ -1.4
LINC02553-201ENST00000529088 KCNT2Q6UVM3 1135 aa6.29□□□□□ -1.4
LINC02553-201ENST00000529088 Q6ZSN1 163 aa6.29□□□□□ -1.4
LINC02553-201ENST00000529088 YTHDC2Q9H6S0 1430 aaKnown RBP6.29□□□□□ -1.4
LINC02553-201ENST00000529088 SLC39A2Q9NP94 309 aa6.29□□□□□ -1.4
LINC02553-201ENST00000529088 SLC52A1Q9NWF4 448 aa6.29□□□□□ -1.4
LINC02553-201ENST00000529088 TNNQ9UQP3 1299 aa6.29□□□□□ -1.4
LINC02553-201ENST00000529088 H0Y858 1186 aa6.28□□□□□ -1.4
LINC02553-201ENST00000529088 DLX3O60479 287 aa6.28□□□□□ -1.4
LINC02553-201ENST00000529088 TNNT2P45379 298 aaPredicted RBP6.28□□□□□ -1.4
LINC02553-201ENST00000529088 PTH1RQ03431 593 aa6.28□□□□□ -1.4
LINC02553-201ENST00000529088 CALD1Q05682 793 aaKnown RBP6.28□□□□□ -1.4
LINC02553-201ENST00000529088 EXOSC9Q06265 439 aaKnown RBP6.28□□□□□ -1.4
LINC02553-201ENST00000529088 ABHD18Q0P651 414 aa6.28□□□□□ -1.4
LINC02553-201ENST00000529088 USP10Q14694 798 aaKnown RBP6.28□□□□□ -1.4
LINC02553-201ENST00000529088 LSM12Q3MHD2 195 aaKnown RBP6.28□□□□□ -1.4
LINC02553-201ENST00000529088 CYP4F22Q6NT55 531 aa6.28□□□□□ -1.4
LINC02553-201ENST00000529088 ITPRIPQ8IWB1 547 aa6.28□□□□□ -1.4
LINC02553-201ENST00000529088 SSH1Q8WYL5 1049 aa6.28□□□□□ -1.4
LINC02553-201ENST00000529088 TGIF2Q9GZN2 237 aa6.28□□□□□ -1.4
LINC02553-201ENST00000529088 GPR27Q9NS67 375 aa6.28□□□□□ -1.4
LINC02553-201ENST00000529088 ZBTB40Q9NUA8 1239 aa6.28□□□□□ -1.4
LINC02553-201ENST00000529088 N4BP2Q86UW6 1770 aaPredicted RBP6.28□□□□□ -1.4
LINC02553-201ENST00000529088 KIF24Q5T7B8 1368 aa6.28□□□□□ -1.4
LINC02553-201ENST00000529088 C3P01024 1663 aa6.27□□□□□ -1.41
LINC02553-201ENST00000529088 YEATS2Q9ULM3 1422 aa6.27□□□□□ -1.41
LINC02553-201ENST00000529088 A0A1W2PQU0 124 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms