RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 DVL2O14641 736 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 KPNA6O60684 536 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 EYA4O95677 639 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 ZNF28P17035 718 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 SDHAP31040 664 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 SOX5P35711 763 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 PLP2Q04941 152 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 GRIN1Q05586 938 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 KIAA2012Q0VF49 1180 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 TMC5Q6UXY8 1006 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 FAM124AQ86V42 546 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 TXNDC5Q8NBS9 432 aaKnown RBP6.62□□□□□ -1.35
CSDE1-212ENST00000529046 CABP5Q9NP86 173 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 CROTQ9UKG9 612 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 ATP23Q9Y6H3 246 aa6.62□□□□□ -1.35
CSDE1-212ENST00000529046 MROH1Q8NDA8 1641 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 VWDEQ8N2E2 1590 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 PRDM15P57071 1507 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-212ENST00000529046 LMTK2Q8IWU2 1503 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 ARHGAP23Q9P227 1491 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 KIF15Q9NS87 1388 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 MROH6A6NGR9 719 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 LTFP02788 710 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 C4BPAP04003 597 aaKnown RBP6.61□□□□□ -1.35
CSDE1-212ENST00000529046 FAHP16930 419 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 PTPN1P18031 435 aaKnown RBP6.61□□□□□ -1.35
CSDE1-212ENST00000529046 NEK4P51957 841 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 HERVK_113P62684 666 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 VASNQ6EMK4 673 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 FILIP1Q7Z7B0 1213 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 RBM12BQ8IXT5 1001 aaKnown RBP6.61□□□□□ -1.35
CSDE1-212ENST00000529046 C2orf69Q8N8R5 385 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 SMC1BQ8NDV3 1235 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 L2HGDHQ9H9P8 463 aa6.61□□□□□ -1.35
CSDE1-212ENST00000529046 POLR1AO95602 1720 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-212ENST00000529046 SLIT1O75093 1534 aa6.6□□□□□ -1.35
CSDE1-212ENST00000529046 FGD6Q6ZV73 1430 aa6.6□□□□□ -1.35
CSDE1-212ENST00000529046 ANKRD30AQ9BXX3 1397 aa6.6□□□□□ -1.35
CSDE1-212ENST00000529046 PTPDC1A2A3K4 754 aa6.6□□□□□ -1.35
CSDE1-212ENST00000529046 ZNF891A8MT65 544 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-212ENST00000529046 CYP1A1P04798 512 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-212ENST00000529046 ATP2A2P16615 1042 aaKnown RBP6.6□□□□□ -1.35
CSDE1-212ENST00000529046 AMPD3Q01432 767 aa6.6□□□□□ -1.35
CSDE1-212ENST00000529046 PAN2Q504Q3 1202 aaKnown RBP6.6□□□□□ -1.35
CSDE1-212ENST00000529046 BORAQ6PGQ7 559 aa6.6□□□□□ -1.35
CSDE1-212ENST00000529046 PRRT2Q7Z6L0 340 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-212ENST00000529046 STRA8Q7Z7C7 330 aa6.6□□□□□ -1.35
CSDE1-212ENST00000529046 LGI4Q8N135 537 aa6.6□□□□□ -1.35
CSDE1-212ENST00000529046 LCORQ96JN0 433 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-212ENST00000529046 KCNH7Q9NS40 1196 aa6.6□□□□□ -1.35
CSDE1-212ENST00000529046 RBPJLQ9UBG7 517 aa6.6□□□□□ -1.35
CSDE1-212ENST00000529046 WASF3Q9UPY6 502 aa6.6□□□□□ -1.35
CSDE1-212ENST00000529046 DAPK1P53355 1430 aa6.59□□□□□ -1.35
CSDE1-212ENST00000529046 KANK1Q14678 1352 aa6.59□□□□□ -1.35
CSDE1-212ENST00000529046 KDM5AP29375 1690 aaKnown RBP6.59□□□□□ -1.35
CSDE1-212ENST00000529046 ANKRD62A6NC57 917 aa6.59□□□□□ -1.35
CSDE1-212ENST00000529046 C9orf118A6NHY6 69 aa6.59□□□□□ -1.35
CSDE1-212ENST00000529046 KRT15P19012 456 aa6.59□□□□□ -1.35
CSDE1-212ENST00000529046 IL13P35225 146 aa6.59□□□□□ -1.35
CSDE1-212ENST00000529046 LSSP48449 732 aa6.59□□□□□ -1.35
CSDE1-212ENST00000529046 MLLT6P55198 1093 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-212ENST00000529046 IRF9Q00978 393 aa6.59□□□□□ -1.35
CSDE1-212ENST00000529046 CC2D1AQ6P1N0 951 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-212ENST00000529046 DDX46Q7L014 1031 aaKnown RBP6.59□□□□□ -1.35
CSDE1-212ENST00000529046 GPATCH3Q96I76 525 aa6.59□□□□□ -1.35
CSDE1-212ENST00000529046 YTHDC1Q96MU7 727 aaKnown RBP6.59□□□□□ -1.35
CSDE1-212ENST00000529046 FAM126AQ9BYI3 521 aaPredicted RBP6.59□□□□□ -1.35
CSDE1-212ENST00000529046 DLL4Q9NR61 685 aa6.59□□□□□ -1.35
CSDE1-212ENST00000529046 RRP7BPQ9NSQ0 103 aa6.59□□□□□ -1.35
CSDE1-212ENST00000529046 SLC52A1Q9NWF4 448 aa6.59□□□□□ -1.35
CSDE1-212ENST00000529046 ADGRL2O95490 1459 aa6.59□□□□□ -1.36
CSDE1-212ENST00000529046 SCAF11Q99590 1463 aaKnown RBP6.59□□□□□ -1.36
CSDE1-212ENST00000529046 PTPN23Q9H3S7 1636 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 K7ESM1 405 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 ZEB2O60315 1214 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 ADCYAP1R1P41586 468 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 TRMT10BQ6PF06 316 aaKnown RBP6.58□□□□□ -1.36
CSDE1-212ENST00000529046 EFHBQ8N7U6 833 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 DTX3Q8N9I9 347 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 OR2W6PQ8NHA6 318 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 LEO1Q8WVC0 666 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-212ENST00000529046 ZCCHC14Q8WYQ9 949 aaKnown RBP6.58□□□□□ -1.36
CSDE1-212ENST00000529046 TMEM168Q9H0V1 697 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 OXSMQ9NWU1 459 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 BTBD7Q9P203 1132 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 FTSJ1Q9UET6 329 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 CNOT11Q9UKZ1 510 aaKnown RBP6.58□□□□□ -1.36
CSDE1-212ENST00000529046 INVSQ9Y283 1065 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 SPO11Q9Y5K1 396 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 EID1Q9Y6B2 187 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 LRRC7Q96NW7 1537 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 IQGAP1P46940 1657 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 NOS1P29475 1434 aa6.58□□□□□ -1.36
CSDE1-212ENST00000529046 TMEM2Q9UHN6 1383 aa6.57□□□□□ -1.36
CSDE1-212ENST00000529046 UBR1Q8IWV7 1749 aa6.57□□□□□ -1.36
CSDE1-212ENST00000529046 RASSF10A6NK89 507 aa6.57□□□□□ -1.36
CSDE1-212ENST00000529046 KCNK3O14649 394 aa6.57□□□□□ -1.36
CSDE1-212ENST00000529046 FNTBP49356 437 aa6.57□□□□□ -1.36
CSDE1-212ENST00000529046 DBPQ10586 325 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-212ENST00000529046 IDI1Q13907 227 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms