RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 DUPD1Q68J44 220 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 ZBTB38Q8NAP3 1195 aaPredicted RBP13.46□□□□□ -0.25
TSKU-203ENST00000527881 DDX12PQ92771 950 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 UTP4Q969X6 686 aaKnown RBP13.46□□□□□ -0.25
TSKU-203ENST00000527881 UIMC1Q96RL1 719 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 NT5C3AQ9H0P0 336 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 EPB41L4BQ9H329 900 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 CCDC134Q9H6E4 229 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 OSGEPQ9NPF4 335 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 NMRK1Q9NWW6 199 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 CTNNAL1Q9UBT7 734 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 PCDHA6Q9UN73 950 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 PCDHA8Q9Y5H6 950 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 GPR75-ASB3A0A0A6YYF3 556 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 ZCCHC18P0CG32 403 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 ACADSP16219 412 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 GSTT1P30711 240 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 RASSF2P50749 326 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 SGSM1Q2NKQ1 1148 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 IRGCQ6NXR0 463 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.46□□□□□ -0.25
TSKU-203ENST00000527881 VCX3BQ9H321 246 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 ERVK-5Q9HDB9 667 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 VCX3AQ9NNX9 186 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 BMP2KQ9NSY1 1161 aaPredicted RBP13.46□□□□□ -0.25
TSKU-203ENST00000527881 ASB3Q9Y575 518 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 RIC1Q4ADV7 1423 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 PFDN1O60925 122 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 GJB6O95452 261 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 SLC9A1P19634 815 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 TPP2P29144 1249 aaPredicted RBP13.46□□□□□ -0.26
TSKU-203ENST00000527881 ERFP50548 548 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 CTSWP56202 376 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.26
TSKU-203ENST00000527881 KLRC3Q07444 240 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 DBN1Q16643 649 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 NT5DC3Q86UY8 548 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 ASAP3Q8TDY4 903 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 CTNNBL1Q8WYA6 563 aaPredicted RBP13.46□□□□□ -0.26
TSKU-203ENST00000527881 STMN2Q93045 179 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 OPTNQ96CV9 577 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 DTNBP1Q96EV8 351 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 BICD1Q96G01 975 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 ZNF512BQ96KM6 892 aaPredicted RBP13.46□□□□□ -0.26
TSKU-203ENST00000527881 DDX50Q9BQ39 737 aaKnown RBP13.46□□□□□ -0.26
TSKU-203ENST00000527881 TBC1D10AQ9BXI6 508 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 RIC8AQ9NPQ8 531 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 ZDHHC18Q9NUE0 388 aa13.46□□□□□ -0.26
TSKU-203ENST00000527881 E7ENQ6 273 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 RIPK2O43353 540 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 CBX6O95503 412 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 RPL21P46778 160 aaKnown RBP13.45□□□□□ -0.26
TSKU-203ENST00000527881 MAPK7Q13164 816 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 RCN1Q15293 331 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 SNX29Q8TEQ0 813 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 NDNQ99608 321 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 KIAA1683Q9H0B3 1180 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 VAT1LQ9HCJ6 419 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 PARP2Q9UGN5 583 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 LRCH1Q9Y2L9 728 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 RPTORQ8N122 1335 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 FAM187AA6NFU0 413 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 LAD1O00515 517 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 OAS1P00973 400 aaKnown RBP13.45□□□□□ -0.26
TSKU-203ENST00000527881 GM2AP17900 193 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 VHLP40337 213 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 KCNH2Q12809 1159 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 PPP2R5EQ16537 467 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 FAM26FQ5R3K3 315 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 SNX30Q5VWJ9 437 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 FBXO41Q8TF61 875 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 ISCA1Q9BUE6 129 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 RHBDL2Q9NX52 303 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 AIPL1Q9NZN9 384 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 C5P01031 1676 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 FLT1P17948 1338 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 KIAA0391O15091 583 aaKnown RBP13.45□□□□□ -0.26
TSKU-203ENST00000527881 AFPP02771 609 aaKnown RBP13.45□□□□□ -0.26
TSKU-203ENST00000527881 TMEM266Q2M3C6 531 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 AADACL2Q6P093 401 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 CEP128Q6ZU80 1094 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 ZNF365Q70YC5 407 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 RUNDC3BQ96NL0 473 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 PICK1Q9NRD5 415 aa13.45□□□□□ -0.26
TSKU-203ENST00000527881 ABCB11O95342 1321 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 PNPLA7Q6ZV29 1317 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 GSTTP1A0A1W2PQM5 241 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 MAPK13O15264 365 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 ATP5HO75947 161 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 GFPT2O94808 682 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 GALCP54803 685 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 DNAJC3Q13217 504 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 NONOQ15233 471 aaKnown RBP eCLIP13.44□□□□□ -0.26
TSKU-203ENST00000527881 SPDYCQ5MJ68 293 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 ARHGEF18Q6ZSZ5 1173 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 PHC3Q8NDX5 983 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 DYDC2Q96IM9 177 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 UBA5Q9GZZ9 404 aa13.44□□□□□ -0.26
TSKU-203ENST00000527881 PPP1R9AQ9ULJ8 1098 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms