RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 SLFN12Q8IYM2 578 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 ZNF710Q8N1W2 664 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 CLP1Q92989 425 aaKnown RBP21.62■■□□□ 1.05
CAPN1-211ENST00000527739 ATP6V0A4Q9HBG4 840 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 C11orf16Q9NQ32 467 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 C5orf67F2Z3F1 127 aa21.61■■□□□ 1.05
CAPN1-211ENST00000527739 P4HBP07237 508 aaKnown RBP21.61■■□□□ 1.05
CAPN1-211ENST00000527739 FGFR4P22455 802 aa21.61■■□□□ 1.05
CAPN1-211ENST00000527739 SAFBQ15424 915 aaKnown RBP eCLIP21.61■■□□□ 1.05
CAPN1-211ENST00000527739 TCEAL5Q5H9L2 206 aa21.61■■□□□ 1.05
CAPN1-211ENST00000527739 FAM102BQ5T8I3 360 aa21.61■■□□□ 1.05
CAPN1-211ENST00000527739 FAM43BQ6ZT52 329 aaPredicted RBP21.61■■□□□ 1.05
CAPN1-211ENST00000527739 CRIPAKQ8N1N5 446 aa21.61■■□□□ 1.05
CAPN1-211ENST00000527739 ALG13Q9NP73 1137 aaKnown RBP21.61■■□□□ 1.05
CAPN1-211ENST00000527739 SUCLA2Q9P2R7 463 aaPredicted RBP21.61■■□□□ 1.05
CAPN1-211ENST00000527739 C9IYK1 514 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 CSDE1O75534 798 aaKnown RBP21.6■■□□□ 1.05
CAPN1-211ENST00000527739 DARSP14868 501 aaKnown RBP21.6■■□□□ 1.05
CAPN1-211ENST00000527739 NPEPPSP55786 919 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 ST3GAL1Q11201 340 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 EPHA7Q15375 998 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 CALCRLQ16602 461 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 ANO5Q75V66 913 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 RHPN2Q8IUC4 686 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 RNF169Q8NCN4 708 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.6■■□□□ 1.05
CAPN1-211ENST00000527739 TNFRSF25Q93038 417 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 FAM122AQ96E09 287 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 CEP170P1Q96L14 293 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 PLVAPQ9BX97 442 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 GCOM2Q9BZD3 368 aaPredicted RBP21.6■■□□□ 1.05
CAPN1-211ENST00000527739 NSUN3Q9H649 340 aaKnown RBP21.6■■□□□ 1.05
CAPN1-211ENST00000527739 RGL1Q9NZL6 768 aa21.6■■□□□ 1.05
CAPN1-211ENST00000527739 FAM86C2PA6NEL3 165 aa21.59■■□□□ 1.05
CAPN1-211ENST00000527739 LINC00271P0C7V0 271 aa21.59■■□□□ 1.05
CAPN1-211ENST00000527739 FGFR1P11362 822 aa21.59■■□□□ 1.05
CAPN1-211ENST00000527739 KCNA5P22460 613 aa21.59■■□□□ 1.05
CAPN1-211ENST00000527739 CDC42EP1Q00587 391 aa21.59■■□□□ 1.05
CAPN1-211ENST00000527739 CYP4A11Q02928 519 aa21.59■■□□□ 1.05
CAPN1-211ENST00000527739 CTTNQ14247 550 aaKnown RBP21.59■■□□□ 1.05
CAPN1-211ENST00000527739 C8orf34Q49A92 452 aa21.59■■□□□ 1.05
CAPN1-211ENST00000527739 TPH2Q8IWU9 490 aa21.59■■□□□ 1.05
CAPN1-211ENST00000527739 DYDC2Q96IM9 177 aa21.59■■□□□ 1.05
CAPN1-211ENST00000527739 ZSCAN31Q96LW9 406 aaPredicted RBP21.59■■□□□ 1.05
CAPN1-211ENST00000527739 JPH2Q9BR39 696 aaPredicted RBP21.59■■□□□ 1.05
CAPN1-211ENST00000527739 CYP26B1Q9NR63 512 aa21.59■■□□□ 1.05
CAPN1-211ENST00000527739 A0A087WZ62 844 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 MAFO75444 373 aaPredicted RBP21.58■■□□□ 1.05
CAPN1-211ENST00000527739 IL9P15248 144 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 POLGP54098 1239 aaPredicted RBP21.58■■□□□ 1.05
CAPN1-211ENST00000527739 DSC3Q14574 896 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 LEXMQ3ZCV2 418 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 TMEM31Q5JXX7 168 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 OTUD6AQ7L8S5 288 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 KLHL23Q8NBE8 558 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 SLC7A3Q8WY07 619 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 C8orf76Q96K31 380 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 NLRP4Q96MN2 994 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 CEP89Q96ST8 783 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 FDXACB1Q9BRP7 624 aaPredicted RBP21.58■■□□□ 1.05
CAPN1-211ENST00000527739 LXNQ9BS40 222 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 LMAN2LQ9H0V9 348 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 BMP2KQ9NSY1 1161 aaPredicted RBP21.58■■□□□ 1.05
CAPN1-211ENST00000527739 TMEM161AQ9NX61 479 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 PCDHA12Q9UN75 941 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 PLAGL2Q9UPG8 496 aa21.58■■□□□ 1.05
CAPN1-211ENST00000527739 TTC3P53804 2025 aa21.58■■□□□ 1.04
CAPN1-211ENST00000527739 MYH9P35579 1960 aaKnown RBP21.57■■□□□ 1.04
CAPN1-211ENST00000527739 IGKV6-21A0A0C4DH24 114 aa21.57■■□□□ 1.04
CAPN1-211ENST00000527739 TXKP42681 527 aa21.57■■□□□ 1.04
CAPN1-211ENST00000527739 FAM189BP81408 668 aa21.57■■□□□ 1.04
CAPN1-211ENST00000527739 KSR1Q8IVT5 923 aa21.57■■□□□ 1.04
CAPN1-211ENST00000527739 ZNF579Q8NAF0 562 aaKnown RBP21.57■■□□□ 1.04
CAPN1-211ENST00000527739 FAM184AQ8NB25 1140 aa21.57■■□□□ 1.04
CAPN1-211ENST00000527739 IGFLR1Q9H665 355 aa21.57■■□□□ 1.04
CAPN1-211ENST00000527739 AAASQ9NRG9 546 aa21.57■■□□□ 1.04
CAPN1-211ENST00000527739 WRAP73Q9P2S5 460 aaPredicted RBP21.57■■□□□ 1.04
CAPN1-211ENST00000527739 PCDHB12Q9Y5F1 795 aa21.57■■□□□ 1.04
CAPN1-211ENST00000527739 EVPLQ92817 2033 aa21.56■■□□□ 1.04
CAPN1-211ENST00000527739 NEMFO60524 1076 aa21.56■■□□□ 1.04
CAPN1-211ENST00000527739 ITGB1P05556 798 aa21.56■■□□□ 1.04
CAPN1-211ENST00000527739 YWHABP31946 246 aaKnown RBP21.56■■□□□ 1.04
CAPN1-211ENST00000527739 GNL2Q13823 731 aaKnown RBP21.56■■□□□ 1.04
CAPN1-211ENST00000527739 NAALADL2Q58DX5 795 aa21.56■■□□□ 1.04
CAPN1-211ENST00000527739 XKR9Q5GH70 373 aa21.56■■□□□ 1.04
CAPN1-211ENST00000527739 FAM178BQ8IXR5 827 aa21.56■■□□□ 1.04
CAPN1-211ENST00000527739 C4orf19Q8IY42 314 aa21.56■■□□□ 1.04
CAPN1-211ENST00000527739 ABI1Q8IZP0 508 aa21.56■■□□□ 1.04
CAPN1-211ENST00000527739 P2RX5Q93086 422 aa21.56■■□□□ 1.04
CAPN1-211ENST00000527739 LLPHQ9BRT6 129 aaKnown RBP21.56■■□□□ 1.04
CAPN1-211ENST00000527739 INO80BQ9C086 356 aaPredicted RBP21.56■■□□□ 1.04
CAPN1-211ENST00000527739 ELAC1Q9H777 363 aaKnown RBP21.56■■□□□ 1.04
CAPN1-211ENST00000527739 ZSWIM4Q9H7M6 989 aa21.56■■□□□ 1.04
CAPN1-211ENST00000527739 TTC12Q9H892 705 aaPredicted RBP21.56■■□□□ 1.04
CAPN1-211ENST00000527739 TYW1Q9NV66 732 aaKnown RBP21.56■■□□□ 1.04
CAPN1-211ENST00000527739 COL4A6Q14031 1691 aa21.56■■□□□ 1.04
CAPN1-211ENST00000527739 H3BQ06 376 aaPredicted RBP21.55■■□□□ 1.04
CAPN1-211ENST00000527739 SFPQP23246 707 aaKnown RBP eCLIP21.55■■□□□ 1.04
CAPN1-211ENST00000527739 MCM7P33993 719 aa21.55■■□□□ 1.04
CAPN1-211ENST00000527739 ECHDC2Q86YB7 292 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms