RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 DHX33Q9H6R0 707 aaKnown RBP29.47■■■□□ 2.31
TSPAN4-217ENST00000527644 RC3H2Q9HBD1 1191 aaKnown RBP29.47■■■□□ 2.31
TSPAN4-217ENST00000527644 RNF216Q9NWF9 866 aaPredicted RBP29.47■■■□□ 2.31
TSPAN4-217ENST00000527644 EYSQ5T1H1 3165 aa29.47■■■□□ 2.31
TSPAN4-217ENST00000527644 SARSP49591 514 aaKnown RBP29.46■■■□□ 2.31
TSPAN4-217ENST00000527644 POLGP54098 1239 aaPredicted RBP29.46■■■□□ 2.31
TSPAN4-217ENST00000527644 FIBCD1Q8N539 461 aa29.46■■■□□ 2.31
TSPAN4-217ENST00000527644 ZNF668Q96K58 619 aaPredicted RBP29.46■■■□□ 2.31
TSPAN4-217ENST00000527644 C17orf80Q9BSJ5 609 aa29.46■■■□□ 2.31
TSPAN4-217ENST00000527644 GCOM2Q9BZD3 368 aaPredicted RBP29.46■■■□□ 2.31
TSPAN4-217ENST00000527644 MTCH2Q9Y6C9 303 aa29.46■■■□□ 2.31
TSPAN4-217ENST00000527644 POTEMA6NI47 508 aa29.45■■■□□ 2.31
TSPAN4-217ENST00000527644 LPXNO60711 386 aa29.45■■■□□ 2.31
TSPAN4-217ENST00000527644 TECP42680 631 aa29.45■■■□□ 2.31
TSPAN4-217ENST00000527644 XKR9Q5GH70 373 aa29.45■■■□□ 2.31
TSPAN4-217ENST00000527644 SLC24A5Q71RS6 500 aa29.45■■■□□ 2.31
TSPAN4-217ENST00000527644 ZNF410Q86VK4 478 aa29.45■■■□□ 2.31
TSPAN4-217ENST00000527644 RHPN2Q8IUC4 686 aa29.45■■■□□ 2.31
TSPAN4-217ENST00000527644 PPM1EQ8WY54 764 aa29.45■■■□□ 2.31
TSPAN4-217ENST00000527644 LRFN2Q9ULH4 789 aa29.45■■■□□ 2.31
TSPAN4-217ENST00000527644 ADGRA3Q8IWK6 1321 aa29.45■■■□□ 2.3
TSPAN4-217ENST00000527644 H3BQV1 296 aa29.44■■■□□ 2.3
TSPAN4-217ENST00000527644 ZBTB39O15060 712 aa29.44■■■□□ 2.3
TSPAN4-217ENST00000527644 GAS2O43903 313 aaKnown RBP29.44■■■□□ 2.3
TSPAN4-217ENST00000527644 TOB1P50616 345 aaPredicted RBP29.44■■■□□ 2.3
TSPAN4-217ENST00000527644 DSC3Q14574 896 aa29.44■■■□□ 2.3
TSPAN4-217ENST00000527644 MCTP1Q6DN14 999 aa29.44■■■□□ 2.3
TSPAN4-217ENST00000527644 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.44■■■□□ 2.3
TSPAN4-217ENST00000527644 FBXO22Q8NEZ5 403 aa29.44■■■□□ 2.3
TSPAN4-217ENST00000527644 ANKEF1Q9NU02 776 aa29.44■■■□□ 2.3
TSPAN4-217ENST00000527644 LMCD1Q9NZU5 365 aa29.44■■■□□ 2.3
TSPAN4-217ENST00000527644 C9IYK1 514 aa29.43■■■□□ 2.3
TSPAN4-217ENST00000527644 XRCC6P12956 609 aaKnown RBP eCLIP29.43■■■□□ 2.3
TSPAN4-217ENST00000527644 BTG3Q14201 252 aaPredicted RBP29.43■■■□□ 2.3
TSPAN4-217ENST00000527644 CCDC85BQ15834 202 aaPredicted RBP29.43■■■□□ 2.3
TSPAN4-217ENST00000527644 EPC2Q52LR7 807 aa29.43■■■□□ 2.3
TSPAN4-217ENST00000527644 TMEM192Q8IY95 271 aa29.43■■■□□ 2.3
TSPAN4-217ENST00000527644 C4orf32Q8N8J7 132 aa29.43■■■□□ 2.3
TSPAN4-217ENST00000527644 GDPD5Q8WTR4 605 aa29.43■■■□□ 2.3
TSPAN4-217ENST00000527644 INO80BQ9C086 356 aaPredicted RBP29.43■■■□□ 2.3
TSPAN4-217ENST00000527644 PCDHB7Q9Y5E2 793 aa29.43■■■□□ 2.3
TSPAN4-217ENST00000527644 A0A087WZ62 844 aa29.42■■■□□ 2.3
TSPAN4-217ENST00000527644 ZSCAN20P17040 1043 aaPredicted RBP29.42■■■□□ 2.3
TSPAN4-217ENST00000527644 FAM189BP81408 668 aa29.42■■■□□ 2.3
TSPAN4-217ENST00000527644 NBR1Q14596 966 aa29.42■■■□□ 2.3
TSPAN4-217ENST00000527644 ERMNQ8TAM6 284 aa29.42■■■□□ 2.3
TSPAN4-217ENST00000527644 TCP11Q8WWU5 503 aa29.42■■■□□ 2.3
TSPAN4-217ENST00000527644 FDXACB1Q9BRP7 624 aaPredicted RBP29.42■■■□□ 2.3
TSPAN4-217ENST00000527644 TUFT1Q9NNX1 390 aa29.42■■■□□ 2.3
TSPAN4-217ENST00000527644 RWDD3Q9Y3V2 267 aa29.42■■■□□ 2.3
TSPAN4-217ENST00000527644 PRRC2BQ5JSZ5 2229 aaKnown RBP29.41■■■□□ 2.3
TSPAN4-217ENST00000527644 SPATA31C1P0DKV0 1188 aa29.41■■■□□ 2.3
TSPAN4-217ENST00000527644 CUL4AQ13619 759 aa29.41■■■□□ 2.3
TSPAN4-217ENST00000527644 EMC2Q15006 297 aa29.41■■■□□ 2.3
TSPAN4-217ENST00000527644 CMTR2Q8IYT2 770 aaKnown RBP29.41■■■□□ 2.3
TSPAN4-217ENST00000527644 MICALL1Q8N3F8 863 aa29.41■■■□□ 2.3
TSPAN4-217ENST00000527644 PSPC1Q8WXF1 523 aaKnown RBP29.41■■■□□ 2.3
TSPAN4-217ENST00000527644 TMEM143Q96AN5 459 aa29.41■■■□□ 2.3
TSPAN4-217ENST00000527644 POLR3CQ9BUI4 534 aaPredicted RBP29.41■■■□□ 2.3
TSPAN4-217ENST00000527644 PCDHB6Q9Y5E3 794 aa29.41■■■□□ 2.3
TSPAN4-217ENST00000527644 COL4A3BPQ9Y5P4 624 aa29.41■■■□□ 2.3
TSPAN4-217ENST00000527644 FXR2P51116 673 aaKnown RBP eCLIP29.4■■■□□ 2.3
TSPAN4-217ENST00000527644 RILPL1Q5EBL4 403 aa29.4■■■□□ 2.3
TSPAN4-217ENST00000527644 LARP1BQ659C4 914 aaKnown RBP29.4■■■□□ 2.3
TSPAN4-217ENST00000527644 CATSPER3Q86XQ3 398 aa29.4■■■□□ 2.3
TSPAN4-217ENST00000527644 KSR1Q8IVT5 923 aa29.4■■■□□ 2.3
TSPAN4-217ENST00000527644 PRPF31Q8WWY3 499 aaKnown RBP29.4■■■□□ 2.3
TSPAN4-217ENST00000527644 CLP1Q92989 425 aaKnown RBP29.4■■■□□ 2.3
TSPAN4-217ENST00000527644 NLRP4Q96MN2 994 aa29.4■■■□□ 2.3
TSPAN4-217ENST00000527644 MTRQ99707 1265 aa29.4■■■□□ 2.3
TSPAN4-217ENST00000527644 ELAC1Q9H777 363 aaKnown RBP29.4■■■□□ 2.3
TSPAN4-217ENST00000527644 PRUNE2Q8WUY3 3088 aa29.39■■■□□ 2.3
TSPAN4-217ENST00000527644 ASAP2O43150 1006 aa29.39■■■□□ 2.3
TSPAN4-217ENST00000527644 DGAT1O75907 488 aa29.39■■■□□ 2.3
TSPAN4-217ENST00000527644 IBSPP21815 317 aaPredicted RBP29.39■■■□□ 2.3
TSPAN4-217ENST00000527644 FGFR4P22455 802 aa29.39■■■□□ 2.3
TSPAN4-217ENST00000527644 SFPQP23246 707 aaKnown RBP eCLIP29.39■■■□□ 2.32e-6■■■■□ 24.2
TSPAN4-217ENST00000527644 PTGDRQ13258 359 aa29.39■■■□□ 2.3
TSPAN4-217ENST00000527644 CCDC43Q96MW1 224 aaKnown RBP29.39■■■□□ 2.3
TSPAN4-217ENST00000527644 BMP2KQ9NSY1 1161 aaPredicted RBP29.39■■■□□ 2.3
TSPAN4-217ENST00000527644 TMEM161AQ9NX61 479 aa29.39■■■□□ 2.3
TSPAN4-217ENST00000527644 COL4A4P53420 1690 aaPredicted RBP29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 H3BNC9 293 aa29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 LAD1O00515 517 aa29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 MED24O75448 989 aa29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 CSDE1O75534 798 aaKnown RBP29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 RB1P06400 928 aa29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 LINC00271P0C7V0 271 aa29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 RPA1P27694 616 aa29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 BMPR1AP36894 532 aa29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 RARRES1P49788 294 aa29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 PIGOQ8TEQ8 1089 aa29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 CHST12Q9NRB3 414 aa29.38■■■□□ 2.29
TSPAN4-217ENST00000527644 ARID2Q68CP9 1835 aa29.37■■■□□ 2.29
TSPAN4-217ENST00000527644 C5orf67F2Z3F1 127 aa29.37■■■□□ 2.29
TSPAN4-217ENST00000527644 LAMTOR4Q0VGL1 99 aa29.37■■■□□ 2.29
TSPAN4-217ENST00000527644 PDIA5Q14554 519 aa29.37■■■□□ 2.29
TSPAN4-217ENST00000527644 HAUS3Q68CZ6 603 aa29.37■■■□□ 2.29
TSPAN4-217ENST00000527644 NACC1Q96RE7 527 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms