RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 FTCDO95954 541 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 PENKP01210 267 aaPredicted RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 TROVE2P10155 538 aaKnown RBP eCLIP8.08□□□□□ -1.12
SOX6-208ENST00000527619 MYBL1P10243 752 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 C7P10643 843 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 IDO1P14902 403 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 MMP13P45452 471 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 CCT8P50990 548 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 RNASE9P60153 205 aaKnown RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 ATP2C1P98194 919 aaPredicted RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 ZNF174Q15697 407 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 EARS2Q5JPH6 523 aaKnown RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 MIIPQ5JXC2 388 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 SPDYCQ5MJ68 293 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 ANKRD13DQ6ZTN6 518 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 KIF2BQ8N4N8 673 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 PBKQ96KB5 322 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 NR1H4Q96RI1 486 aaPredicted RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 NAP1L3Q99457 506 aaPredicted RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 SYT15Q9BQS2 421 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 PREBQ9HCU5 417 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 USP54Q70EL1 1684 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 MYH2Q9UKX2 1941 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 SLIT3O75094 1523 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 C5P01031 1676 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 SNX3O60493 162 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 MTA2O94776 668 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 OAS1P00973 400 aaKnown RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 HSPA1AP0DMV8 641 aaKnown RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 HSPA1BP0DMV9 641 aaKnown RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 SLC1A4P43007 532 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 GNAQP50148 359 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 CASP7P55210 303 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 GFPT1Q06210 699 aaPredicted RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 KLC1Q07866 573 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 PTGDRQ13258 359 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 ASTE1Q2TB18 679 aaPredicted RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 PABPC1LQ4VXU2 614 aaKnown RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 C1orf141Q5JVX7 400 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 TTC38Q5R3I4 469 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 TMEM154Q6P9G4 183 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 ASRGL1Q7L266 308 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 MAEAQ7L5Y9 396 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 RSPH3Q86UC2 560 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 SAMD14Q8IZD0 417 aaPredicted RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 CHCHD4Q8N4Q1 142 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 MIGA1Q8NAN2 632 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 DDX27Q96GQ7 796 aaKnown RBP8.08□□□□□ -1.12
SOX6-208ENST00000527619 TRAPPC9Q96Q05 1148 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 PCMTD2Q9NV79 361 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 PALM3A6NDB9 673 aaPredicted RBP8.07□□□□□ -1.12
SOX6-208ENST00000527619 TMEM247A6NEH6 219 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 EYA2O00167 538 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 WNT7AO00755 349 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 B3GALNT1O75752 331 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 LDHCP07864 332 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 PDHA1P08559 390 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 HSPA8P11142 646 aaKnown RBP8.07□□□□□ -1.12
SOX6-208ENST00000527619 SCG2P13521 617 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 ACADSP16219 412 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 SP100P23497 879 aaPredicted RBP8.07□□□□□ -1.12
SOX6-208ENST00000527619 FOXO4P98177 505 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 EHHADHQ08426 723 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 ALKBH2Q6NS38 261 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 CHADLQ6NUI6 762 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 KIFAP3Q92845 792 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 RAB3IPQ96QF0 476 aaPredicted RBP8.07□□□□□ -1.12
SOX6-208ENST00000527619 PRMT1Q99873 361 aaKnown RBP8.07□□□□□ -1.12
SOX6-208ENST00000527619 VCXQ9H320 206 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 IFT122Q9HBG6 1241 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 INTS9Q9NV88 658 aaKnown RBP8.07□□□□□ -1.12
SOX6-208ENST00000527619 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.07□□□□□ -1.12
SOX6-208ENST00000527619 DKK3Q9UBP4 350 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 CTNNAL1Q9UBT7 734 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 USP15Q9Y4E8 981 aaPredicted RBP8.07□□□□□ -1.12
SOX6-208ENST00000527619 LTN1O94822 1766 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 ARFGEF2Q9Y6D5 1785 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 ATRNO75882 1429 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 ROBO1Q9Y6N7 1651 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 CHD4Q14839 1912 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 SSU72P8A0A1W2PR75 194 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 LRRC53A6NM62 1247 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 RBAK-RBAKDNI3L0D1 243 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 PDGFRBP09619 1106 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 STAT6P42226 847 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 ZAP70P43403 619 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 PDE6CP51160 858 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 LMNB2Q03252 620 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 DHX9Q08211 1270 aaKnown RBP8.07□□□□□ -1.12
SOX6-208ENST00000527619 PLS1Q14651 629 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 NAB2Q15742 525 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 INAQ16352 499 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 LRRC24Q50LG9 513 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 POTEEQ6S8J3 1075 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 CMTR1Q8N1G2 835 aaKnown RBP8.07□□□□□ -1.12
SOX6-208ENST00000527619 GIMAP8Q8ND71 665 aaPredicted RBP8.07□□□□□ -1.12
SOX6-208ENST00000527619 SCFD2Q8WU76 684 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 MAIP1Q8WWC4 291 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 ATP6V0A1Q93050 837 aa8.07□□□□□ -1.12
SOX6-208ENST00000527619 OPTNQ96CV9 577 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms