RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 CHP1Q99653 195 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 MKNK1Q9BUB5 465 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 R3HDMLQ9H3Y0 253 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 ST6GALNAC4Q9H4F1 302 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 ZNF302Q9NR11 478 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 SEPT9Q9UHD8 586 aaPredicted RBP17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 FRMD4BQ9Y2L6 1034 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 CCL15-CCL14A0A0B4J2E2 113 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 PDHXO00330 501 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 DGAT1O75907 488 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 STBD1O95210 358 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 AFPP02771 609 aaKnown RBP17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 KCNMA1Q12791 1236 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 CCL15Q16663 113 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 FBXO38Q6PIJ6 1188 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 KCNV1Q6PIU1 500 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 WDR59Q6PJI9 974 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 CACNA2D4Q7Z3S7 1137 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 HAUS6Q7Z4H7 955 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 MCPH1Q8NEM0 835 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 C17orf75Q9HAS0 396 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 GPRC5CQ9NQ84 441 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 TELO2Q9Y4R8 837 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 SYNGAP1Q96PV0 1343 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 IGSF9BQ9UPX0 1349 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 DNAJC25-GNG10A0A024R161 153 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 CASP4P49662 377 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 DMP1Q13316 513 aaPredicted RBP17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 MYBPC2Q14324 1141 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 DCAF17Q5H9S7 520 aaPredicted RBP17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 TRIM65Q6PJ69 517 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 EEPD1Q7L9B9 569 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 FAM186BQ8IYM0 893 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 MS4A4AQ96JQ5 239 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 CYP26B1Q9NR63 512 aa17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 MAFBQ9Y5Q3 323 aaPredicted RBP17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 EPN1Q9Y6I3 576 aaPredicted RBP17.76■□□□□ 0.43
SNRNP35-204ENST00000527158 CELF2O95319 508 aaKnown RBP17.75■□□□□ 0.43
SNRNP35-204ENST00000527158 GTF2BQ00403 316 aa17.75■□□□□ 0.43
SNRNP35-204ENST00000527158 CDK17Q00537 523 aa17.75■□□□□ 0.43
SNRNP35-204ENST00000527158 MKRN3Q13064 507 aaKnown RBP17.75■□□□□ 0.43
SNRNP35-204ENST00000527158 TCERG1LQ5VWI1 586 aa17.75■□□□□ 0.43
SNRNP35-204ENST00000527158 SLC9A9Q8IVB4 645 aa17.75■□□□□ 0.43
SNRNP35-204ENST00000527158 MNS1Q8NEH6 495 aa17.75■□□□□ 0.43
SNRNP35-204ENST00000527158 UBXN4Q92575 508 aa17.75■□□□□ 0.43
SNRNP35-204ENST00000527158 IKZF4Q9H2S9 585 aa17.75■□□□□ 0.43
SNRNP35-204ENST00000527158 DMAC2Q9NW81 257 aa17.75■□□□□ 0.43
SNRNP35-204ENST00000527158 LOC102724159A0A0B4J2E5 919 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 CCDC169A6NNP5 214 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 EFCAB8A8MWE9 144 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 EPHB6O15197 1021 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 SLC16A4O15374 487 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 ATP8B1O43520 1251 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 FARP2O94887 1054 aaPredicted RBP17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 NDUFA10O95299 355 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 HNRNPH3P31942 346 aaKnown RBP17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 CYP2J2P51589 502 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 NCKAP1LP55160 1127 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 PWP2Q15269 919 aaKnown RBP17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 CRACR2AQ9BSW2 395 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 LSM14BQ9BX40 385 aaKnown RBP17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 NUCKS1Q9H1E3 243 aaKnown RBP17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 MLXIPQ9HAP2 919 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 ATP6V0A4Q9HBG4 840 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 PLAGL2Q9UPG8 496 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 BTBD19C9JJ37 291 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 CYLC1P35663 651 aaPredicted RBP17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 SNRPFP62306 86 aaKnown RBP17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 RRAGAQ7L523 313 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 ANKRD23Q86SG2 305 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 CCDC170Q8IYT3 715 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 CEP72Q9P209 647 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 EXOC7Q9UPT5 735 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 MYH11P35749 1972 aa17.74■□□□□ 0.43
SNRNP35-204ENST00000527158 EXOC3O60645 756 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 GGPS1O95749 300 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 OATP04181 439 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 GCLCP48506 637 aaPredicted RBP17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 FAM160B1Q5W0V3 765 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 METTL7BQ6UX53 244 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 ACRBPQ8NEB7 543 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 BORCS6Q96GS4 357 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 FGD4Q96M96 766 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 PORCNQ9H237 461 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 NHEJ1Q9H9Q4 299 aaPredicted RBP17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 EFCC1Q9HA90 598 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 KMT5AQ9NQR1 393 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 KCNG1Q9UIX4 513 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 IGKV6D-21A0A0A0MT36 114 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 SOCS7O14512 581 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 IPO7O95373 1038 aaKnown RBP17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 NPTX2P47972 431 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 RTP1P59025 263 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 LY6KQ17RY6 165 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 MTERF2Q49AM1 385 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 ANKRD13CQ8N6S4 541 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 TMEM174Q8WUU8 243 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 SPIRE2Q8WWL2 714 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 BRI3BPQ8WY22 251 aa17.73■□□□□ 0.43
SNRNP35-204ENST00000527158 SEPT1Q8WYJ6 367 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms