RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 TOP1MTQ969P6 601 aa16.05■□□□□ 0.16
NXF1-204ENST00000527064 FAM161BQ96MY7 647 aa16.05■□□□□ 0.16
NXF1-204ENST00000527064 INO80BQ9C086 356 aaPredicted RBP16.05■□□□□ 0.16
NXF1-204ENST00000527064 TSPYL2Q9H2G4 693 aaPredicted RBP16.05■□□□□ 0.16
NXF1-204ENST00000527064 ZSCAN16Q9H4T2 348 aaPredicted RBP16.05■□□□□ 0.16
NXF1-204ENST00000527064 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
NXF1-204ENST00000527064 ERVK-5Q9HDB9 667 aa16.05■□□□□ 0.16
NXF1-204ENST00000527064 DBR1Q9UK59 544 aaKnown RBP16.05■□□□□ 0.16
NXF1-204ENST00000527064 ST3GAL5Q9UNP4 418 aa16.05■□□□□ 0.16
NXF1-204ENST00000527064 INSL6Q9Y581 213 aa16.05■□□□□ 0.16
NXF1-204ENST00000527064 COL4A3BPQ9Y5P4 624 aa16.05■□□□□ 0.16
NXF1-204ENST00000527064 PTPRSQ13332 1948 aa16.05■□□□□ 0.16
NXF1-204ENST00000527064 DENND3A2RUS2 1198 aa16.04■□□□□ 0.16
NXF1-204ENST00000527064 ZBTB39O15060 712 aa16.04■□□□□ 0.16
NXF1-204ENST00000527064 DARSP14868 501 aaKnown RBP16.04■□□□□ 0.16
NXF1-204ENST00000527064 MYOGP15173 224 aa16.04■□□□□ 0.16
NXF1-204ENST00000527064 SFPQP23246 707 aaKnown RBP eCLIP16.04■□□□□ 0.16
NXF1-204ENST00000527064 POTEGQ6S5H5 508 aa16.04■□□□□ 0.16
NXF1-204ENST00000527064 TMCO2Q7Z6W1 182 aaPredicted RBP16.04■□□□□ 0.16
NXF1-204ENST00000527064 FAM228AQ86W67 206 aa16.04■□□□□ 0.16
NXF1-204ENST00000527064 ZNF579Q8NAF0 562 aaKnown RBP16.04■□□□□ 0.16
NXF1-204ENST00000527064 PIGOQ8TEQ8 1089 aa16.04■□□□□ 0.16
NXF1-204ENST00000527064 C1orf112Q9NSG2 853 aa16.04■□□□□ 0.16
NXF1-204ENST00000527064 MTMR6Q9Y217 621 aa16.04■□□□□ 0.16
NXF1-204ENST00000527064 COL4A6Q14031 1691 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 VWA3AA6NCI4 1184 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 ENPP3O14638 875 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 ASAP2O43150 1006 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 UPP2O95045 317 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 RESTQ13127 1097 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 MXD4Q14582 209 aaPredicted RBP16.03■□□□□ 0.16
NXF1-204ENST00000527064 FAM117BQ6P1L5 589 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 MCPH1Q8NEM0 835 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 LINC01599Q8WXQ3 324 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 TMEM143Q96AN5 459 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 NLRP4Q96MN2 994 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 YME1L1Q96TA2 773 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 TMX1Q9H3N1 280 aa16.03■□□□□ 0.16
NXF1-204ENST00000527064 BMP2KQ9NSY1 1161 aaPredicted RBP16.03■□□□□ 0.16
NXF1-204ENST00000527064 LOXHD1Q8IVV2 1947 aa16.02■□□□□ 0.16
NXF1-204ENST00000527064 A0A087WZ62 844 aa16.02■□□□□ 0.16
NXF1-204ENST00000527064 ARHGEF35A5YM69 484 aa16.02■□□□□ 0.16
NXF1-204ENST00000527064 USO1O60763 962 aaKnown RBP16.02■□□□□ 0.16
NXF1-204ENST00000527064 STAG3L1P0CL83 205 aa16.02■□□□□ 0.16
NXF1-204ENST00000527064 HTRA4P83105 476 aaPredicted RBP16.02■□□□□ 0.16
NXF1-204ENST00000527064 LAMTOR4Q0VGL1 99 aa16.02■□□□□ 0.16
NXF1-204ENST00000527064 TFDP1Q14186 410 aa16.02■□□□□ 0.16
NXF1-204ENST00000527064 SF3A1Q15459 793 aaKnown RBP16.02■□□□□ 0.16
NXF1-204ENST00000527064 IL17AQ16552 155 aa16.02■□□□□ 0.16
NXF1-204ENST00000527064 NPAS4Q8IUM7 802 aa16.02■□□□□ 0.16
NXF1-204ENST00000527064 PRPF31Q8WWY3 499 aaKnown RBP16.02■□□□□ 0.16
NXF1-204ENST00000527064 ZNF668Q96K58 619 aaPredicted RBP16.02■□□□□ 0.16
NXF1-204ENST00000527064 AK8Q96MA6 479 aa16.02■□□□□ 0.16
NXF1-204ENST00000527064 GUCD1Q96NT3 240 aa16.02■□□□□ 0.16
NXF1-204ENST00000527064 FDXACB1Q9BRP7 624 aaPredicted RBP16.02■□□□□ 0.16
NXF1-204ENST00000527064 SLC26A4O43511 780 aa16.01■□□□□ 0.15
NXF1-204ENST00000527064 ZSCAN20P17040 1043 aaPredicted RBP16.01■□□□□ 0.15
NXF1-204ENST00000527064 PHKA2P46019 1235 aa16.01■□□□□ 0.15
NXF1-204ENST00000527064 SARSP49591 514 aaKnown RBP16.01■□□□□ 0.15
NXF1-204ENST00000527064 GRIN2CQ14957 1233 aa16.01■□□□□ 0.15
NXF1-204ENST00000527064 KCTD17Q8N5Z5 321 aa16.01■□□□□ 0.15
NXF1-204ENST00000527064 CDK5RAP3Q96JB5 506 aa16.01■□□□□ 0.15
NXF1-204ENST00000527064 CDX2Q99626 313 aaPredicted RBP16.01■□□□□ 0.15
NXF1-204ENST00000527064 ADAM2Q99965 735 aa16.01■□□□□ 0.15
NXF1-204ENST00000527064 NT5C3AQ9H0P0 336 aa16.01■□□□□ 0.15
NXF1-204ENST00000527064 XPNPEP1Q9NQW7 623 aa16.01■□□□□ 0.15
NXF1-204ENST00000527064 RGS18Q9NS28 235 aa16.01■□□□□ 0.15
NXF1-204ENST00000527064 DDX19AQ9NUU7 478 aaKnown RBP16.01■□□□□ 0.15
NXF1-204ENST00000527064 LRFN2Q9ULH4 789 aa16.01■□□□□ 0.15
NXF1-204ENST00000527064 KIAA1024Q9UPX6 916 aa16.01■□□□□ 0.15
NXF1-204ENST00000527064 STXBP5LQ9Y2K9 1186 aa16.01■□□□□ 0.15
NXF1-204ENST00000527064 PP2D1A8MPX8 630 aa16■□□□□ 0.15
NXF1-204ENST00000527064 SRGAP2CP0DJJ0 459 aa16■□□□□ 0.15
NXF1-204ENST00000527064 LONP1P36776 959 aaKnown RBP16■□□□□ 0.15
NXF1-204ENST00000527064 TAP1Q03518 808 aa16■□□□□ 0.15
NXF1-204ENST00000527064 PCBP1Q15365 356 aaKnown RBP eCLIP16■□□□□ 0.15
NXF1-204ENST00000527064 PADI6Q6TGC4 694 aa16■□□□□ 0.15
NXF1-204ENST00000527064 SLC24A5Q71RS6 500 aa16■□□□□ 0.15
NXF1-204ENST00000527064 SRGAP1Q7Z6B7 1085 aa16■□□□□ 0.15
NXF1-204ENST00000527064 KSR1Q8IVT5 923 aa16■□□□□ 0.15
NXF1-204ENST00000527064 RNF149Q8NC42 400 aa16■□□□□ 0.15
NXF1-204ENST00000527064 SP7Q8TDD2 431 aaPredicted RBP16■□□□□ 0.15
NXF1-204ENST00000527064 GAS2L1Q99501 681 aaPredicted RBP16■□□□□ 0.15
NXF1-204ENST00000527064 POLR3FQ9H1D9 316 aaPredicted RBP16■□□□□ 0.15
NXF1-204ENST00000527064 BHMT2Q9H2M3 363 aa16■□□□□ 0.15
NXF1-204ENST00000527064 IFT122Q9HBG6 1241 aa16■□□□□ 0.15
NXF1-204ENST00000527064 DACT1Q9NYF0 836 aa16■□□□□ 0.15
NXF1-204ENST00000527064 DNM3Q9UQ16 869 aa16■□□□□ 0.15
NXF1-204ENST00000527064 ADGRA3Q8IWK6 1321 aa15.99■□□□□ 0.15
NXF1-204ENST00000527064 CDH23Q9H251 3354 aa15.99■□□□□ 0.15
NXF1-204ENST00000527064 LCHNA4D1U4 455 aa15.99■□□□□ 0.15
NXF1-204ENST00000527064 RBAK-RBAKDNI3L0D1 243 aa15.99■□□□□ 0.15
NXF1-204ENST00000527064 MGEA5O60502 916 aa15.99■□□□□ 0.15
NXF1-204ENST00000527064 FOSL2P15408 326 aa15.99■□□□□ 0.15
NXF1-204ENST00000527064 ARL2P36404 184 aa15.99■□□□□ 0.15
NXF1-204ENST00000527064 POU5F1BQ06416 359 aa15.99■□□□□ 0.15
NXF1-204ENST00000527064 DSC3Q14574 896 aa15.99■□□□□ 0.15
NXF1-204ENST00000527064 ECM1Q16610 540 aa15.99■□□□□ 0.15
NXF1-204ENST00000527064 CATSPER4Q7RTX7 472 aa15.99■□□□□ 0.15
NXF1-204ENST00000527064 RTN4RL1Q86UN2 441 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms