RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 METTL13Q8N6R0 699 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 FSIP1Q8NA03 581 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 CAGE1Q8TC20 777 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 PRPF31Q8WWY3 499 aaKnown RBP11.98□□□□□ -0.49
NEDD8-205ENST00000527046 LARP4BQ92615 738 aaKnown RBP11.98□□□□□ -0.49
NEDD8-205ENST00000527046 BADQ92934 168 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 DHX58Q96C10 678 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 SCLYQ96I15 445 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 ZNF668Q96K58 619 aaPredicted RBP11.98□□□□□ -0.49
NEDD8-205ENST00000527046 FIZ1Q96SL8 496 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 CELF4Q9BZC1 486 aaKnown RBP11.98□□□□□ -0.49
NEDD8-205ENST00000527046 HIPK3Q9H422 1215 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 AGO3Q9H9G7 860 aaKnown RBP11.98□□□□□ -0.49
NEDD8-205ENST00000527046 SUCLA2Q9P2R7 463 aaPredicted RBP11.98□□□□□ -0.49
NEDD8-205ENST00000527046 STK17AQ9UEE5 414 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 CCDC39Q9UFE4 941 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 ARHGEF35A5YM69 484 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 H0YGN5 161 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 TNRC18O15417 2968 aaPredicted RBP11.97□□□□□ -0.49
NEDD8-205ENST00000527046 CAND2O75155 1236 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 ZNF202O95125 648 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 CXCL10P02778 98 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 SELPP16109 830 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 GUCY2CP25092 1073 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 CASP1P29466 404 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 POLGP54098 1239 aaPredicted RBP11.97□□□□□ -0.49
NEDD8-205ENST00000527046 MRPS6P82932 125 aaKnown RBP11.97□□□□□ -0.49
NEDD8-205ENST00000527046 LAMTOR4Q0VGL1 99 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 MFSD5Q6N075 450 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 CNNM4Q6P4Q7 775 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 CCDC73Q6ZRK6 1079 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 MRPS27Q92552 414 aaKnown RBP11.97□□□□□ -0.49
NEDD8-205ENST00000527046 NTPCRQ9BSD7 190 aaKnown RBP11.97□□□□□ -0.49
NEDD8-205ENST00000527046 MINDY3Q9H8M7 445 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 ATP6V0A4Q9HBG4 840 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 CDY2AQ9Y6F7 541 aa11.97□□□□□ -0.49
NEDD8-205ENST00000527046 TANC1Q9C0D5 1861 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 ADGRA3Q8IWK6 1321 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 A0A087WZ62 844 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 FRMD3A2A2Y4 597 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 HIP1RO75146 1068 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 CSDE1O75534 798 aaKnown RBP11.96□□□□□ -0.49
NEDD8-205ENST00000527046 EDN1P05305 212 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 CTSHP09668 335 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 SLFN14P0C7P3 912 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 CSF2RAP15509 400 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 STAT6P42226 847 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 ZNF131P52739 623 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 NLRP11P59045 1033 aaKnown RBP11.96□□□□□ -0.49
NEDD8-205ENST00000527046 CACNB1Q02641 598 aaPredicted RBP11.96□□□□□ -0.49
NEDD8-205ENST00000527046 MLLT1Q03111 559 aaPredicted RBP11.96□□□□□ -0.49
NEDD8-205ENST00000527046 RAD51AP2Q09MP3 1159 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 BFSP2Q13515 415 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 CAPSQ13938 189 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 DHX8Q14562 1220 aaKnown RBP11.96□□□□□ -0.49
NEDD8-205ENST00000527046 LPIN1Q14693 890 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 KIZQ2M2Z5 673 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 TPRNQ4KMQ1 711 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 FBXO47Q5MNV8 452 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 LRRC8DQ7L1W4 858 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 RTN4RL1Q86UN2 441 aaPredicted RBP11.96□□□□□ -0.49
NEDD8-205ENST00000527046 GPBP1Q86WP2 473 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.49
NEDD8-205ENST00000527046 GRAMD1CQ8IYS0 662 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 IQUBQ8NA54 791 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 RETREG2Q8NC44 543 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 SLC7A3Q8WY07 619 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 PAGE5Q96GU1 130 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 CDK5RAP3Q96JB5 506 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 PPP1R16BQ96T49 567 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 GDF15Q99988 308 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 REEP2Q9BRK0 252 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 FDXACB1Q9BRP7 624 aaPredicted RBP11.96□□□□□ -0.49
NEDD8-205ENST00000527046 PRO3102Q9H379 93 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 PRDM5Q9NQX1 630 aaPredicted RBP11.96□□□□□ -0.49
NEDD8-205ENST00000527046 FAM13BQ9NYF5 915 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 NOD1Q9Y239 953 aa11.96□□□□□ -0.49
NEDD8-205ENST00000527046 NOC2LQ9Y3T9 749 aaKnown RBP11.96□□□□□ -0.49
NEDD8-205ENST00000527046 KLRC4O43908 158 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 NR1I2O75469 434 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 RAG1P15918 1043 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 SYKP43405 635 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 CRYBB1P53674 252 aaPredicted RBP11.95□□□□□ -0.5
NEDD8-205ENST00000527046 POU5F1BQ06416 359 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 EHHADHQ08426 723 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 KRBA2Q6ZNG9 492 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 SV2BQ7L1I2 683 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 DYMQ7RTS9 669 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 TAS1R3Q7RTX0 852 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 RHPN2Q8IUC4 686 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 EXOC8Q8IYI6 725 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 MCPH1Q8NEM0 835 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 DDX12PQ92771 950 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 C7orf25Q9BPX7 421 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 STRA6Q9BX79 667 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 TRIM9Q9C026 710 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 POLR3FQ9H1D9 316 aaPredicted RBP11.95□□□□□ -0.5
NEDD8-205ENST00000527046 TMX1Q9H3N1 280 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 CUEDC2Q9H467 287 aa11.95□□□□□ -0.5
NEDD8-205ENST00000527046 KCND2Q9NZV8 630 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms