RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 CCT2P78371 535 aaKnown RBP4.4□□□□□ -1.71
C11orf54-204ENST00000527003 ATP2B2Q01814 1243 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 KLRC3Q07444 240 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 ZNF543Q08ER8 600 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 BNIP3Q12983 259 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 STK3Q13188 491 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 PABPC4Q13310 644 aaKnown RBP eCLIP4.4□□□□□ -1.71
C11orf54-204ENST00000527003 PPIL2Q13356 520 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 AP3B2Q13367 1082 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 TRIM29Q14134 588 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 VGLL4Q14135 290 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 LDLRAD1Q5T700 205 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 LARP1BQ659C4 914 aaKnown RBP4.4□□□□□ -1.71
C11orf54-204ENST00000527003 MAP1SQ66K74 1059 aaPredicted RBP4.4□□□□□ -1.71
C11orf54-204ENST00000527003 GALNT17Q6IS24 598 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 SEZ6L2Q6UXD5 910 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 BTNL9Q6UXG8 535 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 TMTC3Q6ZXV5 915 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 NOL8Q76FK4 1167 aaKnown RBP4.4□□□□□ -1.71
C11orf54-204ENST00000527003 FASTKD5Q7L8L6 764 aaKnown RBP4.4□□□□□ -1.71
C11orf54-204ENST00000527003 DYMQ7RTS9 669 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 PDZD3Q86UT5 571 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 FAM160B2Q86V87 743 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 CCDC83Q8IWF9 413 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 SMARCC2Q8TAQ2 1214 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 NETO1Q8TDF5 533 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 CCDC12Q8WUD4 166 aaPredicted RBP4.4□□□□□ -1.71
C11orf54-204ENST00000527003 RRP36Q96EU6 259 aaKnown RBP4.4□□□□□ -1.71
C11orf54-204ENST00000527003 C12orf42Q96LP6 360 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 SPZ1Q9BXG8 430 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 OSBPL7Q9BZF2 842 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 MAF1Q9H063 256 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 GLT8D2Q9H1C3 349 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 ACSS3Q9H6R3 686 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 VCPKMTQ9H867 229 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 GBA2Q9HCG7 927 aaPredicted RBP4.4□□□□□ -1.71
C11orf54-204ENST00000527003 NMRK2Q9NPI5 230 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 SH3GLB2Q9NR46 395 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 RAD18Q9NS91 495 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 TMOD4Q9NZQ9 345 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 LMCD1Q9NZU5 365 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 CHMP5Q9NZZ3 219 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 SEC63Q9UGP8 760 aaKnown RBP4.4□□□□□ -1.71
C11orf54-204ENST00000527003 GPN3Q9UHW5 284 aaPredicted RBP4.4□□□□□ -1.71
C11orf54-204ENST00000527003 FEM1BQ9UK73 627 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 ZHX2Q9Y6X8 837 aa4.4□□□□□ -1.71
C11orf54-204ENST00000527003 ZNF646O15015 1829 aaPredicted RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 MYO5AQ9Y4I1 1855 aaKnown RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 PTPDC1A2A3K4 754 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 KLRF2D3W0D1 207 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 H3BQV1 296 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 TMPRSS2O15393 492 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 DYNC1LI2O43237 492 aaPredicted RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 ZNF862O60290 1169 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 FBXO24O75426 580 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 CELF2O95319 508 aaKnown RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 NDUFB10O96000 172 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 GSTP1P09211 210 aaKnown RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 ZBTB48P10074 688 aaPredicted RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 CETPP11597 493 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 YY1P25490 414 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 CALML3P27482 149 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 GJB2P29033 226 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 STAT2P52630 851 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 GTF2A2P52657 109 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 INHBEP58166 350 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 SPP2Q13103 211 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 SNAPC2Q13487 334 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 RRP1BQ14684 758 aaKnown RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 SAFBQ15424 915 aaKnown RBP eCLIP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 NTRK3Q16288 839 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 CCDC96Q2M329 555 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 CYP27C1Q4G0S4 372 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 HP1BP3Q5SSJ5 553 aaPredicted RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 PRAMEF18Q5VWM3 479 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 MCTP2Q6DN12 878 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 ZSWIM9Q86XI8 627 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 SULF2Q8IWU5 870 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 LRRC47Q8N1G4 583 aaKnown RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 NECAB1Q8N987 351 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 PRPF38AQ8NAV1 312 aaKnown RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 NSUN7Q8NE18 718 aaKnown RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 CCDC148Q8NFR7 591 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 BICD2Q8TD16 824 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 ZNF526Q8TF50 670 aaPredicted RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 ZKSCAN4Q969J2 545 aaPredicted RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 HHIPL1Q96JK4 782 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 MYL10Q9BUA6 226 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 GSX1Q9H4S2 264 aaPredicted RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 ZSCAN16Q9H4T2 348 aaPredicted RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 RIOX1Q9H6W3 641 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 NCOA5Q9HCD5 579 aaKnown RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 BRMS1Q9HCU9 246 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 C1GALT1Q9NS00 363 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 HOXC10Q9NYD6 342 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 ORC3Q9UBD5 711 aaPredicted RBP4.39□□□□□ -1.71
C11orf54-204ENST00000527003 MAD2L2Q9UI95 211 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 VAV3Q9UKW4 847 aa4.39□□□□□ -1.71
C11orf54-204ENST00000527003 SLC45A1Q9Y2W3 748 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms