RNA–Protein interactions for RNA: ENST00000526195.5

CTSB-210, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-210ENST00000526195 POLGP54098 1239 aaPredicted RBP18.04■□□□□ 0.48
CTSB-210ENST00000526195 GRB10Q13322 594 aa18.04■□□□□ 0.48
CTSB-210ENST00000526195 CUL4AQ13619 759 aa18.04■□□□□ 0.48
CTSB-210ENST00000526195 OTUD6AQ7L8S5 288 aa18.04■□□□□ 0.48
CTSB-210ENST00000526195 RHPN2Q8IUC4 686 aa18.04■□□□□ 0.48
CTSB-210ENST00000526195 KSR1Q8IVT5 923 aa18.04■□□□□ 0.48
CTSB-210ENST00000526195 NEK9Q8TD19 979 aa18.04■□□□□ 0.48
CTSB-210ENST00000526195 GDPD5Q8WTR4 605 aa18.04■□□□□ 0.48
CTSB-210ENST00000526195 SLC7A3Q8WY07 619 aa18.04■□□□□ 0.48
CTSB-210ENST00000526195 PPM1EQ8WY54 764 aa18.04■□□□□ 0.48
CTSB-210ENST00000526195 SCLT1Q96NL6 688 aa18.04■□□□□ 0.48
CTSB-210ENST00000526195 ADAM2Q99965 735 aa18.04■□□□□ 0.48
CTSB-210ENST00000526195 PRRC2BQ5JSZ5 2229 aaKnown RBP18.03■□□□□ 0.48
CTSB-210ENST00000526195 A0A087WZ62 844 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 H3BQV1 296 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 DGKIO75912 1065 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 LYPLA2O95372 231 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 CCDC85BQ15834 202 aaPredicted RBP18.03■□□□□ 0.48
CTSB-210ENST00000526195 XKR9Q5GH70 373 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 ODR4Q5SWX8 454 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 CATSPER3Q86XQ3 398 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 NPAS4Q8IUM7 802 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 ZNF710Q8N1W2 664 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 SLC17A8Q8NDX2 589 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 TMEM143Q96AN5 459 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 ZNF689Q96CS4 500 aaPredicted RBP18.03■□□□□ 0.48
CTSB-210ENST00000526195 JPH2Q9BR39 696 aaPredicted RBP18.03■□□□□ 0.48
CTSB-210ENST00000526195 FDXACB1Q9BRP7 624 aaPredicted RBP18.03■□□□□ 0.48
CTSB-210ENST00000526195 RGS18Q9NS28 235 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 PPME1Q9Y570 386 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 MTCH2Q9Y6C9 303 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 COL4A6Q14031 1691 aa18.03■□□□□ 0.48
CTSB-210ENST00000526195 ADGRA3Q8IWK6 1321 aa18.02■□□□□ 0.48
CTSB-210ENST00000526195 DENND3A2RUS2 1198 aa18.02■□□□□ 0.48
CTSB-210ENST00000526195 MED24O75448 989 aa18.02■□□□□ 0.48
CTSB-210ENST00000526195 RFC5P40937 340 aa18.02■□□□□ 0.48
CTSB-210ENST00000526195 PTGDRQ13258 359 aa18.02■□□□□ 0.48
CTSB-210ENST00000526195 DSC3Q14574 896 aa18.02■□□□□ 0.48
CTSB-210ENST00000526195 EMC2Q15006 297 aa18.02■□□□□ 0.48
CTSB-210ENST00000526195 LARP1BQ659C4 914 aaKnown RBP18.02■□□□□ 0.48
CTSB-210ENST00000526195 MICALL1Q8N3F8 863 aa18.02■□□□□ 0.48
CTSB-210ENST00000526195 PIGOQ8TEQ8 1089 aa18.02■□□□□ 0.48
CTSB-210ENST00000526195 NLRP4Q96MN2 994 aa18.02■□□□□ 0.48
CTSB-210ENST00000526195 C9IYK1 514 aa18.01■□□□□ 0.47
CTSB-210ENST00000526195 LINC00271P0C7V0 271 aa18.01■□□□□ 0.47
CTSB-210ENST00000526195 POU3F3P20264 500 aaPredicted RBP18.01■□□□□ 0.47
CTSB-210ENST00000526195 SARSP49591 514 aaKnown RBP18.01■□□□□ 0.47
CTSB-210ENST00000526195 RARRES1P49788 294 aa18.01■□□□□ 0.47
CTSB-210ENST00000526195 GATMP50440 423 aa18.01■□□□□ 0.47
CTSB-210ENST00000526195 EPC2Q52LR7 807 aa18.01■□□□□ 0.47
CTSB-210ENST00000526195 SLC24A5Q71RS6 500 aa18.01■□□□□ 0.47
CTSB-210ENST00000526195 FIBCD1Q8N539 461 aa18.01■□□□□ 0.47
CTSB-210ENST00000526195 PRPF31Q8WWY3 499 aaKnown RBP18.01■□□□□ 0.47
CTSB-210ENST00000526195 GCOM2Q9BZD3 368 aaPredicted RBP18.01■□□□□ 0.47
CTSB-210ENST00000526195 XPNPEP1Q9NQW7 623 aa18.01■□□□□ 0.47
CTSB-210ENST00000526195 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.01■□□□□ 0.47
CTSB-210ENST00000526195 COL4A3BPQ9Y5P4 624 aa18.01■□□□□ 0.47
CTSB-210ENST00000526195 STAG3L1P0CL83 205 aa18■□□□□ 0.47
CTSB-210ENST00000526195 FXR2P51116 673 aaKnown RBP eCLIP18■□□□□ 0.47
CTSB-210ENST00000526195 CDC42EP1Q00587 391 aa18■□□□□ 0.47
CTSB-210ENST00000526195 BTG3Q14201 252 aaPredicted RBP18■□□□□ 0.47
CTSB-210ENST00000526195 ZNF410Q86VK4 478 aa18■□□□□ 0.47
CTSB-210ENST00000526195 EXOC8Q8IYI6 725 aa18■□□□□ 0.47
CTSB-210ENST00000526195 FBXO22Q8NEZ5 403 aa18■□□□□ 0.47
CTSB-210ENST00000526195 PSPC1Q8WXF1 523 aaKnown RBP18■□□□□ 0.47
CTSB-210ENST00000526195 MTRQ99707 1265 aa18■□□□□ 0.47
CTSB-210ENST00000526195 IFT122Q9HBG6 1241 aa18■□□□□ 0.47
CTSB-210ENST00000526195 TUFT1Q9NNX1 390 aa18■□□□□ 0.47
CTSB-210ENST00000526195 PRDM6Q9NQX0 595 aa18■□□□□ 0.47
CTSB-210ENST00000526195 C1orf112Q9NSG2 853 aa18■□□□□ 0.47
CTSB-210ENST00000526195 ANKEF1Q9NU02 776 aa18■□□□□ 0.47
CTSB-210ENST00000526195 LRFN2Q9ULH4 789 aa18■□□□□ 0.47
CTSB-210ENST00000526195 GTPBP6O43824 516 aaPredicted RBP17.99■□□□□ 0.47
CTSB-210ENST00000526195 RPA1P27694 616 aa17.99■□□□□ 0.47
CTSB-210ENST00000526195 FAM189BP81408 668 aa17.99■□□□□ 0.47
CTSB-210ENST00000526195 LAMTOR4Q0VGL1 99 aa17.99■□□□□ 0.47
CTSB-210ENST00000526195 IL17AQ16552 155 aa17.99■□□□□ 0.47
CTSB-210ENST00000526195 ECM1Q16610 540 aa17.99■□□□□ 0.47
CTSB-210ENST00000526195 PAN2Q504Q3 1202 aaKnown RBP17.99■□□□□ 0.47
CTSB-210ENST00000526195 RILPL1Q5EBL4 403 aa17.99■□□□□ 0.47
CTSB-210ENST00000526195 FAM102BQ5T8I3 360 aa17.99■□□□□ 0.47
CTSB-210ENST00000526195 POTEGQ6S5H5 508 aa17.99■□□□□ 0.47
CTSB-210ENST00000526195 FAM43BQ6ZT52 329 aaPredicted RBP17.99■□□□□ 0.47
CTSB-210ENST00000526195 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.99■□□□□ 0.47
CTSB-210ENST00000526195 TMEM192Q8IY95 271 aa17.99■□□□□ 0.47
CTSB-210ENST00000526195 POLR3CQ9BUI4 534 aaPredicted RBP17.99■□□□□ 0.47
CTSB-210ENST00000526195 PCDHB7Q9Y5E2 793 aa17.99■□□□□ 0.47
CTSB-210ENST00000526195 GAS2O43903 313 aaKnown RBP17.98■□□□□ 0.47
CTSB-210ENST00000526195 SRGAP2CP0DJJ0 459 aa17.98■□□□□ 0.47
CTSB-210ENST00000526195 ZSCAN20P17040 1043 aaPredicted RBP17.98■□□□□ 0.47
CTSB-210ENST00000526195 FERMT3Q86UX7 667 aa17.98■□□□□ 0.47
CTSB-210ENST00000526195 ERMNQ8TAM6 284 aa17.98■□□□□ 0.47
CTSB-210ENST00000526195 TCP11Q8WWU5 503 aa17.98■□□□□ 0.47
CTSB-210ENST00000526195 CLP1Q92989 425 aaKnown RBP17.98■□□□□ 0.47
CTSB-210ENST00000526195 CCDC43Q96MW1 224 aaKnown RBP17.98■□□□□ 0.47
CTSB-210ENST00000526195 SAMD11Q96NU1 681 aa17.98■□□□□ 0.47
CTSB-210ENST00000526195 MINDY3Q9H8M7 445 aa17.98■□□□□ 0.47
CTSB-210ENST00000526195 LRWD1Q9UFC0 647 aa17.98■□□□□ 0.47
CTSB-210ENST00000526195 MRPL42Q9Y6G3 142 aaKnown RBP17.98■□□□□ 0.47
CTSB-210ENST00000526195 COL4A4P53420 1690 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms