RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 EAF2Q96CJ1 260 aaPredicted RBP5.99□□□□□ -1.45
CD44-220ENST00000525688 AMNQ9BXJ7 453 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 BCAS3Q9H6U6 928 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 UCKL1Q9NWZ5 548 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 GALNT8Q9NY28 637 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 TOP2BQ02880 1626 aa5.99□□□□□ -1.45
CD44-220ENST00000525688 SYNJ1O43426 1573 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 TDRD9Q8NDG6 1382 aaKnown RBP5.98□□□□□ -1.45
CD44-220ENST00000525688 BIN1O00499 593 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 MAFO75444 373 aaPredicted RBP5.98□□□□□ -1.45
CD44-220ENST00000525688 PFKMP08237 780 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 CLEC2LP0C7M8 214 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 NCAM1P13591 858 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 LPOP22079 712 aaPredicted RBP5.98□□□□□ -1.45
CD44-220ENST00000525688 PAX3P23760 479 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 AKAP5P24588 427 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 VIPR1P32241 457 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 STAT5AP42229 794 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 SLC5A3P53794 718 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 BCAR1P56945 870 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 SRSF2Q01130 221 aaKnown RBP5.98□□□□□ -1.45
CD44-220ENST00000525688 PFKPQ01813 784 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 CACNB2Q08289 660 aaPredicted RBP5.98□□□□□ -1.45
CD44-220ENST00000525688 MUM1Q2TAK8 710 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 MINDY4Q4G0A6 757 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 C4orf46Q504U0 113 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 TOR2AQ5JU69 321 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 ARTNQ5T4W7 220 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 CCDC62Q6P9F0 684 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 UNQ6494/PRO21346Q6UXR6 183 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 ZSWIM9Q86XI8 627 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 LYSMD2Q8IV50 215 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 AUTS2Q8WXX7 1259 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 FERMT2Q96AC1 680 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 SLC39A2Q9NP94 309 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 INCENPQ9NQS7 918 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 DENND2AQ9ULE3 1009 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 WASF3Q9UPY6 502 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 WDR97A6NE52 1622 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 BIVM-ERCC5R4GMW8 1640 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 ABCA10Q8WWZ4 1543 aa5.98□□□□□ -1.45
CD44-220ENST00000525688 ECE1P42892 770 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 RGS3P49796 1198 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 ADKP55263 362 aaKnown RBP5.97□□□□□ -1.45
CD44-220ENST00000525688 RHBDL3P58872 404 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 TCIRG1Q13488 830 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 ACAP2Q15057 778 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 STILQ15468 1287 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 RRP12Q5JTH9 1297 aaKnown RBP5.97□□□□□ -1.45
CD44-220ENST00000525688 PRAMEF9Q5VWM5 478 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 VASNQ6EMK4 673 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 CLEC4GQ6UXB4 293 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 LIPIQ6XZB0 460 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 EPM2AIP1Q7L775 607 aaPredicted RBP5.97□□□□□ -1.45
CD44-220ENST00000525688 TMC6Q7Z403 805 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 DTX3Q8N9I9 347 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 DDX11Q96FC9 970 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 BTBD2Q9BX70 525 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 PITHD1Q9GZP4 211 aaPredicted RBP5.97□□□□□ -1.45
CD44-220ENST00000525688 QRSL1Q9H0R6 528 aaKnown RBP5.97□□□□□ -1.45
CD44-220ENST00000525688 KCTD10Q9H3F6 313 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 PCDH18Q9HCL0 1135 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 DLL4Q9NR61 685 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 PNMA2Q9UL42 364 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 PLA2G2DQ9UNK4 145 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 MYPNQ86TC9 1320 aa5.97□□□□□ -1.45
CD44-220ENST00000525688 ST20-MTHFSA0A0A6YYL1 179 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 PEX10O60683 326 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 IL33O95760 270 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 LPLP06858 475 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 C5AR1P21730 350 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 GPR15P49685 360 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 ZNF200P98182 395 aaPredicted RBP5.96□□□□□ -1.46
CD44-220ENST00000525688 FOXD4Q12950 439 aaPredicted RBP5.96□□□□□ -1.46
CD44-220ENST00000525688 KCNMB1Q16558 191 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 ANO4Q32M45 955 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 CD300LDQ6UXZ3 194 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 DGKHQ86XP1 1220 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 FAM26EQ8N5C1 309 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 RPGRQ92834 1020 aaKnown RBP5.96□□□□□ -1.46
CD44-220ENST00000525688 CLIP3Q96DZ5 547 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 TMEM209Q96SK2 561 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 CSRNP2Q9H175 543 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 PRDM12Q9H4Q4 367 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 OBP2AQ9NY56 170 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 RBPJLQ9UBG7 517 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 PRSS50Q9UI38 385 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 ZBTB21Q9ULJ3 1066 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 EDARQ9UNE0 448 aa5.96□□□□□ -1.46
CD44-220ENST00000525688 OAS3Q9Y6K5 1087 aaKnown RBP5.96□□□□□ -1.46
CD44-220ENST00000525688 A0A0A6YYJ9 748 aa5.95□□□□□ -1.46
CD44-220ENST00000525688 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.95□□□□□ -1.46
CD44-220ENST00000525688 ERC2O15083 957 aa5.95□□□□□ -1.46
CD44-220ENST00000525688 APOL3O95236 402 aa5.95□□□□□ -1.46
CD44-220ENST00000525688 C8BP07358 591 aa5.95□□□□□ -1.46
CD44-220ENST00000525688 APEX1P27695 318 aaKnown RBP5.95□□□□□ -1.46
CD44-220ENST00000525688 LGALS4P56470 323 aa5.95□□□□□ -1.46
CD44-220ENST00000525688 SRSF3P84103 164 aaKnown RBP5.95□□□□□ -1.46
CD44-220ENST00000525688 BIRC2Q13490 618 aa5.95□□□□□ -1.46
CD44-220ENST00000525688 TRIM25Q14258 630 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms