RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 LINC00271P0C7V0 271 aa20.8■□□□□ 0.92
CAPN1-203ENST00000525013 ZSCAN20P17040 1043 aaPredicted RBP20.8■□□□□ 0.92
CAPN1-203ENST00000525013 EPHA7Q15375 998 aa20.8■□□□□ 0.92
CAPN1-203ENST00000525013 CALCRLQ16602 461 aa20.8■□□□□ 0.92
CAPN1-203ENST00000525013 ZSCAN31Q96LW9 406 aaPredicted RBP20.8■□□□□ 0.92
CAPN1-203ENST00000525013 KIF2CQ99661 725 aa20.8■□□□□ 0.92
CAPN1-203ENST00000525013 XIRP2A4UGR9 3374 aa20.8■□□□□ 0.92
CAPN1-203ENST00000525013 MAFO75444 373 aaPredicted RBP20.79■□□□□ 0.92
CAPN1-203ENST00000525013 CSDE1O75534 798 aaKnown RBP20.79■□□□□ 0.92
CAPN1-203ENST00000525013 DARSP14868 501 aaKnown RBP20.79■□□□□ 0.92
CAPN1-203ENST00000525013 ATP2B1P20020 1258 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 NPEPPSP55786 919 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 CDC42EP1Q00587 391 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 DSC3Q14574 896 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 FAM102BQ5T8I3 360 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 C8orf76Q96K31 380 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 CEP170P1Q96L14 293 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 CEP89Q96ST8 783 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 JPH2Q9BR39 696 aaPredicted RBP20.79■□□□□ 0.92
CAPN1-203ENST00000525013 LLPHQ9BRT6 129 aaKnown RBP20.79■□□□□ 0.92
CAPN1-203ENST00000525013 LXNQ9BS40 222 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 PLVAPQ9BX97 442 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 GCOM2Q9BZD3 368 aaPredicted RBP20.79■□□□□ 0.92
CAPN1-203ENST00000525013 ATP6V0A4Q9HBG4 840 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 CYP26B1Q9NR63 512 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 RGL1Q9NZL6 768 aa20.79■□□□□ 0.92
CAPN1-203ENST00000525013 SUCLA2Q9P2R7 463 aaPredicted RBP20.79■□□□□ 0.92
CAPN1-203ENST00000525013 IGKV6-21A0A0C4DH24 114 aa20.78■□□□□ 0.92
CAPN1-203ENST00000525013 TBKBP1A7MCY6 615 aa20.78■□□□□ 0.92
CAPN1-203ENST00000525013 GRM6O15303 877 aa20.78■□□□□ 0.92
CAPN1-203ENST00000525013 CSPG5O95196 566 aa20.78■□□□□ 0.92
CAPN1-203ENST00000525013 BMP1P13497 986 aa20.78■□□□□ 0.92
CAPN1-203ENST00000525013 FGFR4P22455 802 aa20.78■□□□□ 0.92
CAPN1-203ENST00000525013 CYP4A11Q02928 519 aa20.78■□□□□ 0.92
CAPN1-203ENST00000525013 SPOUT1Q5T280 376 aaKnown RBP20.78■□□□□ 0.92
CAPN1-203ENST00000525013 RHPN2Q8IUC4 686 aa20.78■□□□□ 0.92
CAPN1-203ENST00000525013 DYDC2Q96IM9 177 aa20.78■□□□□ 0.92
CAPN1-203ENST00000525013 UHRF1Q96T88 793 aaPredicted RBP20.78■□□□□ 0.92
CAPN1-203ENST00000525013 UBE2ZQ9H832 354 aaPredicted RBP20.78■□□□□ 0.92
CAPN1-203ENST00000525013 ALG13Q9NP73 1137 aaKnown RBP20.78■□□□□ 0.92
CAPN1-203ENST00000525013 SH2B1Q9NRF2 756 aaPredicted RBP20.78■□□□□ 0.92
CAPN1-203ENST00000525013 TMEM161AQ9NX61 479 aa20.78■□□□□ 0.92
CAPN1-203ENST00000525013 WRAP73Q9P2S5 460 aaPredicted RBP20.78■□□□□ 0.92
CAPN1-203ENST00000525013 PCDHA12Q9UN75 941 aa20.78■□□□□ 0.92
CAPN1-203ENST00000525013 SPTBN5Q9NRC6 3674 aaKnown RBP20.77■□□□□ 0.92
CAPN1-203ENST00000525013 ATG2AQ2TAZ0 1938 aa20.77■□□□□ 0.92
CAPN1-203ENST00000525013 NEMFO60524 1076 aa20.77■□□□□ 0.92
CAPN1-203ENST00000525013 FAM189BP81408 668 aa20.77■□□□□ 0.92
CAPN1-203ENST00000525013 SPIRE1Q08AE8 756 aa20.77■□□□□ 0.92
CAPN1-203ENST00000525013 CTTNQ14247 550 aaKnown RBP20.77■□□□□ 0.92
CAPN1-203ENST00000525013 TCEAL5Q5H9L2 206 aa20.77■□□□□ 0.92
CAPN1-203ENST00000525013 OTUD6AQ7L8S5 288 aa20.77■□□□□ 0.92
CAPN1-203ENST00000525013 TPH2Q8IWU9 490 aa20.77■□□□□ 0.92
CAPN1-203ENST00000525013 ZNF579Q8NAF0 562 aaKnown RBP20.77■□□□□ 0.92
CAPN1-203ENST00000525013 SLC7A3Q8WY07 619 aa20.77■□□□□ 0.92
CAPN1-203ENST00000525013 LMAN2LQ9H0V9 348 aa20.77■□□□□ 0.92
CAPN1-203ENST00000525013 NSUN3Q9H649 340 aaKnown RBP20.77■□□□□ 0.92
CAPN1-203ENST00000525013 ZSWIM4Q9H7M6 989 aa20.77■□□□□ 0.92
CAPN1-203ENST00000525013 A0A087WZ62 844 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 TNFRSF10AO00220 468 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 WNT7AO00755 349 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 FGFR1P11362 822 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 KCNA5P22460 613 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 YWHABP31946 246 aaKnown RBP20.76■□□□□ 0.91
CAPN1-203ENST00000525013 TXKP42681 527 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 POLGP54098 1239 aaPredicted RBP20.76■□□□□ 0.91
CAPN1-203ENST00000525013 HMGN5P82970 282 aaKnown RBP20.76■□□□□ 0.91
CAPN1-203ENST00000525013 EP400NLQ6ZTU2 488 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 KSR1Q8IVT5 923 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 C4orf19Q8IY42 314 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 EXOC8Q8IYI6 725 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 FAM184AQ8NB25 1140 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 RNF169Q8NCN4 708 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 NLRP4Q96MN2 994 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 NECAB3Q96P71 396 aaPredicted RBP20.76■□□□□ 0.91
CAPN1-203ENST00000525013 FDXACB1Q9BRP7 624 aaPredicted RBP20.76■□□□□ 0.91
CAPN1-203ENST00000525013 ELAC1Q9H777 363 aaKnown RBP20.76■□□□□ 0.91
CAPN1-203ENST00000525013 TTC12Q9H892 705 aaPredicted RBP20.76■□□□□ 0.91
CAPN1-203ENST00000525013 BMP2KQ9NSY1 1161 aaPredicted RBP20.76■□□□□ 0.91
CAPN1-203ENST00000525013 PLAGL2Q9UPG8 496 aa20.76■□□□□ 0.91
CAPN1-203ENST00000525013 MCM7P33993 719 aa20.75■□□□□ 0.91
CAPN1-203ENST00000525013 GNL2Q13823 731 aaKnown RBP20.75■□□□□ 0.91
CAPN1-203ENST00000525013 XKR9Q5GH70 373 aa20.75■□□□□ 0.91
CAPN1-203ENST00000525013 KLHL23Q8NBE8 558 aa20.75■□□□□ 0.91
CAPN1-203ENST00000525013 P2RX5Q93086 422 aa20.75■□□□□ 0.91
CAPN1-203ENST00000525013 EIF2AK1Q9BQI3 630 aaKnown RBP20.75■□□□□ 0.91
CAPN1-203ENST00000525013 ARID2Q68CP9 1835 aa20.75■□□□□ 0.91
CAPN1-203ENST00000525013 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.74■□□□□ 0.91
CAPN1-203ENST00000525013 ZBTB39O15060 712 aa20.74■□□□□ 0.91
CAPN1-203ENST00000525013 ITGB1P05556 798 aa20.74■□□□□ 0.91
CAPN1-203ENST00000525013 SFPQP23246 707 aaKnown RBP eCLIP20.74■□□□□ 0.91
CAPN1-203ENST00000525013 RFC5P40937 340 aa20.74■□□□□ 0.91
CAPN1-203ENST00000525013 RBM25P49756 843 aaKnown RBP20.74■□□□□ 0.91
CAPN1-203ENST00000525013 RABEP1Q15276 862 aa20.74■□□□□ 0.91
CAPN1-203ENST00000525013 NAALADL2Q58DX5 795 aa20.74■□□□□ 0.91
CAPN1-203ENST00000525013 ZNF410Q86VK4 478 aa20.74■□□□□ 0.91
CAPN1-203ENST00000525013 ECHDC2Q86YB7 292 aa20.74■□□□□ 0.91
CAPN1-203ENST00000525013 TMEM143Q96AN5 459 aa20.74■□□□□ 0.91
CAPN1-203ENST00000525013 INO80BQ9C086 356 aaPredicted RBP20.74■□□□□ 0.91
CAPN1-203ENST00000525013 AAASQ9NRG9 546 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms