RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ACSF2Q96CM8 615 aaPredicted RBP8.72□□□□□ -1.01
NEDD8-203ENST00000524927 ATG4CQ96DT6 458 aa8.72□□□□□ -1.01
NEDD8-203ENST00000524927 MRFAP1L1Q96HT8 127 aa8.72□□□□□ -1.01
NEDD8-203ENST00000524927 SRPK1Q96SB4 655 aaKnown RBP8.72□□□□□ -1.01
NEDD8-203ENST00000524927 PORCNQ9H237 461 aa8.72□□□□□ -1.01
NEDD8-203ENST00000524927 TNKS2Q9H2K2 1166 aa8.72□□□□□ -1.01
NEDD8-203ENST00000524927 PIF1Q9H611 641 aa8.72□□□□□ -1.01
NEDD8-203ENST00000524927 LOC285556D6RIA3 1793 aa8.71□□□□□ -1.01
NEDD8-203ENST00000524927 SLC15A5A6NIM6 579 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 UPK3BL1B0FP48 263 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 UPK3BL2E5RIL1 263 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 H3BQ06 376 aaPredicted RBP8.71□□□□□ -1.02
NEDD8-203ENST00000524927 CTNND1O60716 968 aaKnown RBP8.71□□□□□ -1.02
NEDD8-203ENST00000524927 DNAJA2O60884 412 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 COBLO75128 1261 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 TIAF1O95411 115 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 GUCY2CP25092 1073 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 USP11P51784 963 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 YARSP54577 528 aaKnown RBP8.71□□□□□ -1.02
NEDD8-203ENST00000524927 CASP7P55210 303 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 DMWDQ09019 674 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 FXNQ16595 210 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 APOBEC3HQ6NTF7 200 aaKnown RBP8.71□□□□□ -1.02
NEDD8-203ENST00000524927 KIAA2013Q8IYS2 634 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 KCT2Q8NC54 265 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 NUP133Q8WUM0 1156 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 CEP41Q9BYV8 373 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 GREM2Q9H772 168 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 C7orf69Q9H7B7 122 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 STARD7Q9NQZ5 370 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 RBPJLQ9UBG7 517 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 TJP2Q9UDY2 1190 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 ACTL7BQ9Y614 415 aa8.71□□□□□ -1.02
NEDD8-203ENST00000524927 PHIPQ8WWQ0 1821 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 GAS2O43903 313 aaKnown RBP8.7□□□□□ -1.02
NEDD8-203ENST00000524927 NME1P15531 152 aaKnown RBP8.7□□□□□ -1.02
NEDD8-203ENST00000524927 SPINK2P20155 84 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 SDHBP21912 280 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 HOXA7P31268 230 aaPredicted RBP8.7□□□□□ -1.02
NEDD8-203ENST00000524927 HERVK_113P62684 666 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 IRX3P78415 501 aaPredicted RBP8.7□□□□□ -1.02
NEDD8-203ENST00000524927 CHRNDQ07001 517 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 SERINC3Q13530 473 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 FAM47AQ5JRC9 791 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 OLFML2BQ68BL8 750 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 SLC6A19Q695T7 634 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 GIMAP6Q6P9H5 292 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 TTC6Q86TZ1 520 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 LURAP1LQ8IV03 231 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 MCATQ8IVS2 390 aaKnown RBP8.7□□□□□ -1.02
NEDD8-203ENST00000524927 PHACTR4Q8IZ21 702 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 CELF2-AS1Q8N7Q2 184 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 C19orf47Q8N9M1 422 aaKnown RBP8.7□□□□□ -1.02
NEDD8-203ENST00000524927 CCDC191Q8NCU4 936 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 C2CD4AQ8NCU7 369 aaPredicted RBP8.7□□□□□ -1.02
NEDD8-203ENST00000524927 MKL1Q969V6 931 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 TMEM87BQ96K49 555 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 KRTAP4-7Q9BYR0 210 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 CWC22Q9HCG8 908 aaKnown RBP8.7□□□□□ -1.02
NEDD8-203ENST00000524927 FAM105AQ9NUU6 356 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 LRRFIP2Q9Y608 721 aaKnown RBP8.7□□□□□ -1.02
NEDD8-203ENST00000524927 SPEF2Q9C093 1822 aa8.7□□□□□ -1.02
NEDD8-203ENST00000524927 COL4A4P53420 1690 aaPredicted RBP8.69□□□□□ -1.02
NEDD8-203ENST00000524927 A0A1B0GUL7 405 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 A0A1W2PQH9 124 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 NEFMP07197 916 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 ADRB1P08588 477 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 NFIAQ12857 509 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 LCE1DQ5T752 114 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 CDCP2Q5VXM1 449 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 SMYD4Q8IYR2 804 aaPredicted RBP8.69□□□□□ -1.02
NEDD8-203ENST00000524927 RPUSD2Q8IZ73 545 aaKnown RBP8.69□□□□□ -1.02
NEDD8-203ENST00000524927 PHOSPHO2Q8TCD6 241 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 ISL2Q96A47 359 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 ASIC4Q96FT7 647 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 FAM46AQ96IP4 442 aaKnown RBP8.69□□□□□ -1.02
NEDD8-203ENST00000524927 MPHOSPH8Q99549 860 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 CNNM2Q9H8M5 875 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 FBRSQ9HAH7 460 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 XPNPEP3Q9NQH7 507 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 KNSTRNQ9Y448 316 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 SLC12A7Q9Y666 1083 aa8.69□□□□□ -1.02
NEDD8-203ENST00000524927 KIF28PB7ZC32 967 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 PEX10O60683 326 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 DDAH1O94760 285 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 RAB6AP20340 208 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 CYP2C18P33260 490 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 NTF4P34130 210 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 PREPP48147 710 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 CDK7P50613 346 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 HMGCS2P54868 508 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 CCNA1P78396 465 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 SPP2Q13103 211 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 SMAD2Q15796 467 aaKnown RBP8.68□□□□□ -1.02
NEDD8-203ENST00000524927 DDR2Q16832 855 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 MRPL41Q8IXM3 137 aaKnown RBP8.68□□□□□ -1.02
NEDD8-203ENST00000524927 TAB3Q8N5C8 712 aaPredicted RBP8.68□□□□□ -1.02
NEDD8-203ENST00000524927 NPLOC4Q8TAT6 608 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 SLC9A7Q96T83 725 aa8.68□□□□□ -1.02
NEDD8-203ENST00000524927 DPH2Q9BQC3 489 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms