RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ASB1Q9Y576 335 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 PBRM1Q86U86 1689 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 CUX1P39880 1505 aa2.72□□□□□ -1.97
CD44-212ENST00000524922 ADCY10Q96PN6 1610 aa2.71□□□□□ -1.97
CD44-212ENST00000524922 MAP3K4Q9Y6R4 1608 aa2.71□□□□□ -1.97
CD44-212ENST00000524922 KDM2BQ8NHM5 1336 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 SCDO00767 359 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 FOXP2O15409 715 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 NAT1P18440 290 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 ANTXR2P58335 489 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 ZC3H6P61129 1189 aaKnown RBP2.71□□□□□ -1.98
CD44-212ENST00000524922 ABHD18Q0P651 414 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 RIN1Q13671 783 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 ACAP1Q15027 740 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 ZNF568Q3ZCX4 644 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 FAM47CQ5HY64 1035 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 C1QL3Q5VWW1 255 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 GRAMD4Q6IC98 578 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 ADGRE4PQ86SQ3 457 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 TMPRSS6Q8IU80 811 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 ZC3H7AQ8IWR0 971 aaKnown RBP2.71□□□□□ -1.98
CD44-212ENST00000524922 SHCBP1Q8NEM2 672 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 FAM89AQ96GI7 184 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 GPHA2Q96T91 129 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 CDC6Q99741 560 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 ZNF341Q9BYN7 854 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 TRIM8Q9BZR9 551 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 NELFAQ9H3P2 528 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 SNTG2Q9NY99 539 aa2.71□□□□□ -1.98
CD44-212ENST00000524922 PUF60Q9UHX1 559 aaKnown RBP2.71□□□□□ -1.98
CD44-212ENST00000524922 EPRSP07814 1512 aaKnown RBP2.71□□□□□ -1.98
CD44-212ENST00000524922 PPRC1Q5VV67 1664 aaKnown RBP2.7□□□□□ -1.98
CD44-212ENST00000524922 PRAMEF22A3QJZ6 481 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 C2orf78A6NCI8 922 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 GRXCR1A8MXD5 290 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 GSTA4O15217 222 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 EFCAB14O75071 495 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 STK10O94804 968 aaKnown RBP2.7□□□□□ -1.98
CD44-212ENST00000524922 PRLP01236 227 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 TGM1P22735 817 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 STAT3P40763 770 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 ALDH6A1Q02252 535 aaKnown RBP2.7□□□□□ -1.98
CD44-212ENST00000524922 ADAM15Q13444 863 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 TUBA3CQ13748 450 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 RRP1BQ14684 758 aaKnown RBP2.7□□□□□ -1.98
CD44-212ENST00000524922 GRM7Q14831 915 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 TMEM177Q53S58 311 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 ZC3H12BQ5HYM0 836 aaKnown RBP2.7□□□□□ -1.98
CD44-212ENST00000524922 CREB3L3Q68CJ9 461 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 TUBA3EQ6PEY2 450 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 HTR3DQ70Z44 454 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 OTOP2Q7RTS6 562 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 BRAPQ7Z569 592 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 RABGGTAQ92696 567 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 PLEKHG4BQ96PX9 1271 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 DEPDC7Q96QD5 511 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 CEP89Q96ST8 783 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 AGAP2Q99490 1192 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 FOXB1Q99853 325 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 C12orf65Q9H3J6 166 aaKnown RBP2.7□□□□□ -1.98
CD44-212ENST00000524922 MMRN2Q9H8L6 949 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 GPRC5BQ9NZH0 403 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 NDOR1Q9UHB4 597 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 VWA7Q9Y334 891 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 TNIKQ9UKE5 1360 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 PTPRMP28827 1452 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 SPATA31D1Q6ZQQ2 1576 aa2.7□□□□□ -1.98
CD44-212ENST00000524922 CCDC85CA6NKD9 419 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 TRAF5O00463 557 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 APEX1P27695 318 aaKnown RBP2.69□□□□□ -1.98
CD44-212ENST00000524922 HIBADHP31937 336 aaKnown RBP2.69□□□□□ -1.98
CD44-212ENST00000524922 SCNN1GP51170 649 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 RABGGTBP53611 331 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 TGFB2P61812 414 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 IRF9Q00978 393 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 TOB2Q14106 344 aaPredicted RBP2.69□□□□□ -1.98
CD44-212ENST00000524922 SMN1Q16637 294 aaKnown RBP2.69□□□□□ -1.98
CD44-212ENST00000524922 CC2D1AQ6P1N0 951 aaPredicted RBP2.69□□□□□ -1.98
CD44-212ENST00000524922 Q6ZRM9 215 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 RHOUQ7L0Q8 258 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 CLEC14AQ86T13 490 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 ZNF575Q86XF7 245 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 ULK2Q8IYT8 1036 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 LILRB2Q8N423 598 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 IGSF22Q8N9C0 903 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 ARMC5Q96C12 935 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 C16orf92Q96LL3 132 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 CLUHP3Q96NS8 147 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 MPHOSPH9Q99550 1183 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 DNAJC7Q99615 494 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 MRPL4Q9BYD3 311 aaKnown RBP2.69□□□□□ -1.98
CD44-212ENST00000524922 NCOA5Q9HCD5 579 aaKnown RBP2.69□□□□□ -1.98
CD44-212ENST00000524922 AURKAIP1Q9NWT8 199 aaPredicted RBP2.69□□□□□ -1.98
CD44-212ENST00000524922 C11orf21Q9P2W6 132 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 MAGI2Q86UL8 1455 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 NEO1Q92859 1461 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 ADAMTSL3P82987 1691 aa2.69□□□□□ -1.98
CD44-212ENST00000524922 WDR33Q9C0J8 1336 aaKnown RBP2.68□□□□□ -1.98
CD44-212ENST00000524922 PTPRTO14522 1441 aa2.68□□□□□ -1.98
CD44-212ENST00000524922 UACAQ9BZF9 1416 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms