RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 SMYD4Q8IYR2 804 aaPredicted RBP18.39■□□□□ 0.53
BEST1-203ENST00000524877 GANCQ8TET4 914 aa18.39■□□□□ 0.53
BEST1-203ENST00000524877 GRK7Q8WTQ7 553 aa18.39■□□□□ 0.53
BEST1-203ENST00000524877 DSG3P32926 999 aa18.39■□□□□ 0.53
BEST1-203ENST00000524877 REM2Q8IYK8 340 aaPredicted RBP18.39■□□□□ 0.53
BEST1-203ENST00000524877 EXOC4Q96A65 974 aa18.39■□□□□ 0.53
BEST1-203ENST00000524877 ATP11BQ9Y2G3 1177 aa18.39■□□□□ 0.53
BEST1-203ENST00000524877 STRNO43815 780 aa18.39■□□□□ 0.53
BEST1-203ENST00000524877 FKTNO75072 461 aa18.39■□□□□ 0.53
BEST1-203ENST00000524877 COBLO75128 1261 aa18.39■□□□□ 0.53
BEST1-203ENST00000524877 TADA2AO75478 443 aa18.39■□□□□ 0.53
BEST1-203ENST00000524877 DNAJC24Q6P3W2 148 aa18.39■□□□□ 0.53
BEST1-203ENST00000524877 FAM114A2Q9NRY5 505 aa18.39■□□□□ 0.53
BEST1-203ENST00000524877 OPA1O60313 960 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 PEX19P40855 299 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 COASYQ13057 564 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 LONRF2Q1L5Z9 754 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 B4GALNT4Q76KP1 1039 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 RDM1Q8NG50 284 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 NSRP1Q9H0G5 558 aaKnown RBP18.38■□□□□ 0.53
BEST1-203ENST00000524877 RNF219Q5W0B1 726 aaPredicted RBP18.38■□□□□ 0.53
BEST1-203ENST00000524877 STOX1Q6ZVD7 989 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 CEP120Q8N960 986 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 GOLGA8CPA6NN73 597 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 GOLGA8SH3BPF8 625 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 ITGA4P13612 1032 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 ARL4AP40617 200 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 SPATC1LQ9H0A9 340 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 PVALEFA0A1B0GWK0 134 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 KIAA0391O15091 583 aaKnown RBP18.38■□□□□ 0.53
BEST1-203ENST00000524877 SKIP12755 728 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 RFC1P35251 1148 aaPredicted RBP18.38■□□□□ 0.53
BEST1-203ENST00000524877 RFX6Q8HWS3 928 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 GPD1LQ8N335 351 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 MYRIPQ8NFW9 859 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 IDI2Q9BXS1 227 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 SH3BP5O60239 455 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 PCK1P35558 622 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 VCXQ9H320 206 aa18.38■□□□□ 0.53
BEST1-203ENST00000524877 PGK2P07205 417 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 PSMC4P43686 418 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 PDIA5Q14554 519 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 EMC2Q15006 297 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 MRPL47Q9HD33 250 aaKnown RBP18.37■□□□□ 0.53
BEST1-203ENST00000524877 KCNQ5Q9NR82 932 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 IPO11Q9UI26 975 aaKnown RBP18.37■□□□□ 0.53
BEST1-203ENST00000524877 ATRNO75882 1429 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 LRRN2O75325 713 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 NFKBIAP25963 317 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 PRKCEQ02156 737 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 RIT2Q99578 217 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 TCF7P36402 384 aaPredicted RBP18.37■□□□□ 0.53
BEST1-203ENST00000524877 C8orf74Q6P047 294 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 FAM117BQ6P1L5 589 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 GLB1LQ6UWU2 654 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 WHAMMQ8TF30 809 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 MYO1FO00160 1098 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 ALDH3A1P30838 453 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 THPOP40225 353 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 BSPRYQ5W0U4 402 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 TTC30AQ86WT1 665 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 DDX27Q96GQ7 796 aaKnown RBP18.37■□□□□ 0.53
BEST1-203ENST00000524877 MAD2L2Q9UI95 211 aa18.37■□□□□ 0.53
BEST1-203ENST00000524877 ZNF653Q96CK0 615 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 FBXO28Q9NVF7 368 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 MYPNQ86TC9 1320 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 NR3C1P04150 777 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 ATP5DP30049 168 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 SLC12A2P55011 1212 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 KRT17Q04695 432 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 VGLL4Q14135 290 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 PHF20Q9BVI0 1012 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 RBSNQ9H1K0 784 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 BCL2L12Q9HB09 334 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 HMX1Q9NP08 348 aaPredicted RBP18.36■□□□□ 0.53
BEST1-203ENST00000524877 ADKP55263 362 aaKnown RBP18.36■□□□□ 0.53
BEST1-203ENST00000524877 GJB4Q9NTQ9 266 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 SLC38A7Q9NVC3 462 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 MRIQ9BWK5 157 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 LMCD1Q9NZU5 365 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 PARP4Q9UKK3 1724 aaKnown RBP18.36■□□□□ 0.53
BEST1-203ENST00000524877 PKP1Q13835 747 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 CFAP221Q4G0U5 840 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 EFCAB12Q6NXP0 572 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 NLGN2Q8NFZ4 835 aa18.36■□□□□ 0.53
BEST1-203ENST00000524877 AGO2Q9UKV8 859 aaKnown RBP18.36■□□□□ 0.53
BEST1-203ENST00000524877 NOL3O60936 208 aaKnown RBP18.35■□□□□ 0.53
BEST1-203ENST00000524877 ZNF445P59923 1031 aa18.35■□□□□ 0.53
BEST1-203ENST00000524877 UBLCP1Q8WVY7 318 aaPredicted RBP18.35■□□□□ 0.53
BEST1-203ENST00000524877 CASP7P55210 303 aa18.35■□□□□ 0.53
BEST1-203ENST00000524877 GEN1Q17RS7 908 aa18.35■□□□□ 0.53
BEST1-203ENST00000524877 GIPC1O14908 333 aa18.35■□□□□ 0.53
BEST1-203ENST00000524877 AFG1LQ8WV93 481 aa18.35■□□□□ 0.53
BEST1-203ENST00000524877 TMEM143Q96AN5 459 aa18.35■□□□□ 0.53
BEST1-203ENST00000524877 ASCC2Q9H1I8 757 aaPredicted RBP18.35■□□□□ 0.53
BEST1-203ENST00000524877 SMIM23A6NLE4 172 aa18.35■□□□□ 0.53
BEST1-203ENST00000524877 EIF3CLB5ME19 914 aaKnown RBP18.35■□□□□ 0.53
BEST1-203ENST00000524877 PFDN1O60925 122 aa18.35■□□□□ 0.53
BEST1-203ENST00000524877 TBXAS1P24557 533 aaPredicted RBP18.35■□□□□ 0.53
BEST1-203ENST00000524877 TMEM62Q0P6H9 643 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms