RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 RBM19Q9Y4C8 960 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 PCDHB7Q9Y5E2 793 aa12.52□□□□□ -0.41
TRAPPC4-204ENST00000524797 DARSP14868 501 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 EIF4BP23588 611 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 NPEPPSP55786 919 aa12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 FAM189BP81408 668 aa12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 SLC24A5Q71RS6 500 aa12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 C4orf19Q8IY42 314 aa12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 NLRP7Q8WX94 980 aa12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 LXNQ9BS40 222 aa12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 CYP26B1Q9NR63 512 aa12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 RGL1Q9NZL6 768 aa12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 SUCLA2Q9P2R7 463 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 COG5Q9UP83 839 aa12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 PPME1Q9Y570 386 aa12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 CDH23Q9H251 3354 aa12.51□□□□□ -0.41
TRAPPC4-204ENST00000524797 NEMFO60524 1076 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 DNM2P50570 870 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 TFF2Q03403 129 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 CTTNQ14247 550 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 SCLT1Q96NL6 688 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 MTMR9Q96QG7 549 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 JPH2Q9BR39 696 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 LMAN2LQ9H0V9 348 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 FGFR4P22455 802 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 RFC5P40937 340 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 CDC42EP1Q00587 391 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 TIGD5Q53EQ6 642 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 FAM184AQ8NB25 1140 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 FBXO18Q8NFZ0 1043 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 CEP170P1Q96L14 293 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 EIF2AK1Q9BQI3 630 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 C11orf84Q9BUA3 381 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 PLVAPQ9BX97 442 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 GCOM2Q9BZD3 368 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 TMEM60Q9H2L4 133 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 ELAC1Q9H777 363 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 ZSWIM4Q9H7M6 989 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 TMEM161AQ9NX61 479 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 PCDHA12Q9UN75 941 aa12.5□□□□□ -0.41
TRAPPC4-204ENST00000524797 A0A087WZ62 844 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 GRM6O15303 877 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 ZSCAN20P17040 1043 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 ATP2B1P20020 1258 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 YWHABP31946 246 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 TXKP42681 527 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 CYP4A11Q02928 519 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 AAK1Q2M2I8 961 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 FAM102BQ5T8I3 360 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 ZNF410Q86VK4 478 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 RHPN2Q8IUC4 686 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 NEK9Q8TD19 979 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 HLA-CQ95604 372 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 FDXACB1Q9BRP7 624 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 FOXP1Q9H334 677 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 DHX33Q9H6R0 707 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 TTC12Q9H892 705 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 ATP6V0A4Q9HBG4 840 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 RNF19AQ9NV58 838 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 CUL9Q8IWT3 2517 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 BRWD1Q9NSI6 2320 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 TBKBP1A7MCY6 615 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 SLITRK3O94933 977 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 NAALADL2Q58DX5 795 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 XKR9Q5GH70 373 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 OTUD6AQ7L8S5 288 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 ECHDC2Q86YB7 292 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 KSR1Q8IVT5 923 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 TPH2Q8IWU9 490 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 EXOC8Q8IYI6 725 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 IL27Q8NEV9 243 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 P2RX5Q93086 422 aa12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 NSUN3Q9H649 340 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-204ENST00000524797 MYO7AQ13402 2215 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 ZBTB39O15060 712 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 CSDE1O75534 798 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 LYPLA2O95372 231 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 FGFR1P11362 822 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 BMP1P13497 986 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 MCM7P33993 719 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 KCNQ1P51787 676 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 POLGP54098 1239 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 ORC2Q13416 577 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 EMC2Q15006 297 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 ZNF174Q15697 407 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 TCEAL5Q5H9L2 206 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 ADAMTS19Q8TE59 1207 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 SLC7A3Q8WY07 619 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 TMEM143Q96AN5 459 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 HSD17B14Q9BPX1 270 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 UPF2Q9HAU5 1272 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 PLAGL2Q9UPG8 496 aa12.48□□□□□ -0.41
TRAPPC4-204ENST00000524797 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 ST18O60284 1047 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 TTC38Q5R3I4 469 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 NLRP4Q96MN2 994 aa12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 INO80BQ9C086 356 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC4-204ENST00000524797 UBE2ZQ9H832 354 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms