RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 CLP1Q92989 425 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-242ENST00000524292 ZNF274Q96GC6 653 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-242ENST00000524292 NECAB3Q96P71 396 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-242ENST00000524292 UIMC1Q96RL1 719 aa9.61□□□□□ -0.87
CTNNA1-242ENST00000524292 TM6SF1Q9BZW5 370 aa9.61□□□□□ -0.87
CTNNA1-242ENST00000524292 NSUN3Q9H649 340 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-242ENST00000524292 SLC24A3Q9HC58 644 aa9.61□□□□□ -0.87
CTNNA1-242ENST00000524292 LRFN2Q9ULH4 789 aa9.61□□□□□ -0.87
CTNNA1-242ENST00000524292 PADI3Q9ULW8 664 aa9.61□□□□□ -0.87
CTNNA1-242ENST00000524292 PCDHA10Q9Y5I2 948 aa9.61□□□□□ -0.87
CTNNA1-242ENST00000524292 MAFBQ9Y5Q3 323 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-242ENST00000524292 RALGAPA2Q2PPJ7 1873 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 DENND3A2RUS2 1198 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 C5orf67F2Z3F1 127 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 GPR182O15218 404 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 MAGEB2O15479 319 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 NCK2O43639 380 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 GAS7O60861 476 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 RPS6KA5O75582 802 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 DGKIO75912 1065 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 CDKL5O76039 1030 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 DEXIO95424 95 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 KCNA5P22460 613 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 TMOD1P28289 359 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 BMPR1AP36894 532 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 JAK3P52333 1124 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 NFX1Q12986 1120 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 TOB2Q14106 344 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 LEXMQ3ZCV2 418 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 LRCH2Q5VUJ6 765 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 GALNT17Q6IS24 598 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 EP400NLQ6ZTU2 488 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 TRMT1LQ7Z2T5 733 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 CMTR2Q8IYT2 770 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 KIAA0319LQ8IZA0 1049 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 METTL13Q8N6R0 699 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 MAP7D2Q96T17 732 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 RIT2Q99578 217 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 PLVAPQ9BX97 442 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 UPF3BQ9BZI7 483 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 LMAN2LQ9H0V9 348 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 RC3H2Q9HBD1 1191 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 PDRG1Q9NUG6 133 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 GABBR1Q9UBS5 961 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 PCDHA4Q9UN74 947 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 FAM50BQ9Y247 325 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 TTC3P53804 2025 aa9.6□□□□□ -0.87
CTNNA1-242ENST00000524292 TCF20Q9UGU0 1960 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 ZBTB42B2RXF5 422 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 ADAMTS3O15072 1205 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 C22orf31O95567 290 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 XBP1P17861 261 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 IBSPP21815 317 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 SFNP31947 248 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 SARSP49591 514 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 CRYBB1P53674 252 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 STK3Q13188 491 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 KIZQ2M2Z5 673 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 TMEM266Q2M3C6 531 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 NAALADL2Q58DX5 795 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 TCEAL5Q5H9L2 206 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 PARP9Q8IXQ6 854 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 TBCKQ8TEA7 893 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 LINC01599Q8WXQ3 324 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 PPP2R3CQ969Q6 453 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 LENG9Q96B70 501 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 ZNF689Q96CS4 500 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 TEKT3Q9BXF9 490 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 C1QTNF1Q9BXJ1 281 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 DISC1Q9NRI5 854 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 C1orf112Q9NSG2 853 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 NRBP2Q9NSY0 501 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 AKT3Q9Y243 479 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 PCDHB7Q9Y5E2 793 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 NLRC5Q86WI3 1866 aa9.59□□□□□ -0.87
CTNNA1-242ENST00000524292 MYH9P35579 1960 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 MSH4O15457 936 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 CHMP2AO43633 222 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 MMP1P03956 469 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 VTNP04004 478 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 ATP4AP20648 1035 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 PRKCEQ02156 737 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 NONOQ15233 471 aaKnown RBP eCLIP9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 PAN2Q504Q3 1202 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 PTCRAQ6ISU1 281 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 SLC24A5Q71RS6 500 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 BLIDQ8IZY5 108 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 DAGLBQ8NCG7 672 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 RDM1Q8NG50 284 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 P2RX5Q93086 422 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 PABPC5Q96DU9 382 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 SCLT1Q96NL6 688 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 PPP1R16BQ96T49 567 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 OSMRQ99650 979 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 ADAM2Q99965 735 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 SLKQ9H2G2 1235 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 TMX1Q9H3N1 280 aa9.58□□□□□ -0.88
CTNNA1-242ENST00000524292 ERVK-5Q9HDB9 667 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms