RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 CHST12Q9NRB3 414 aa13.35□□□□□ -0.27
SPARC-206ENST00000524277 DACT1Q9NYF0 836 aa13.35□□□□□ -0.27
SPARC-206ENST00000524277 EVPLQ92817 2033 aa13.35□□□□□ -0.27
SPARC-206ENST00000524277 LOXHD1Q8IVV2 1947 aa13.35□□□□□ -0.27
SPARC-206ENST00000524277 FAM86C2PA6NEL3 165 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 ADAMTS3O15072 1205 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 ZNF862O60290 1169 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 DKC1O60832 514 aaKnown RBP eCLIP13.34□□□□□ -0.27
SPARC-206ENST00000524277 PPFIA3O75145 1194 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 PSMD10O75832 226 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 CDKL5O76039 1030 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 DARSP14868 501 aaKnown RBP13.34□□□□□ -0.27
SPARC-206ENST00000524277 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.27
SPARC-206ENST00000524277 IRS1P35568 1242 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 GATMP50440 423 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 GPC3P51654 580 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 KRT17Q04695 432 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 BMS1Q14692 1282 aaKnown RBP13.34□□□□□ -0.27
SPARC-206ENST00000524277 HERC4Q5GLZ8 1057 aaPredicted RBP13.34□□□□□ -0.27
SPARC-206ENST00000524277 TRMT1LQ7Z2T5 733 aaKnown RBP13.34□□□□□ -0.27
SPARC-206ENST00000524277 MIER3Q7Z3K6 550 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 ADGRD2Q7Z7M1 963 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 BLIDQ8IZY5 108 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 LRRC43Q8N309 656 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 MRPS27Q92552 414 aaKnown RBP13.34□□□□□ -0.27
SPARC-206ENST00000524277 UIMC1Q96RL1 719 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 INO80BQ9C086 356 aaPredicted RBP13.34□□□□□ -0.27
SPARC-206ENST00000524277 CWH43Q9H720 699 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 CLEC1BQ9P126 229 aa13.34□□□□□ -0.27
SPARC-206ENST00000524277 A0A0U1RQF3 1178 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 FSCN2O14926 492 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 LINC01565O15544 149 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 EDIL3O43854 480 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 SKIP12755 728 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 ATF7P17544 494 aaPredicted RBP13.33□□□□□ -0.28
SPARC-206ENST00000524277 XBP1P17861 261 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 IBSPP21815 317 aaPredicted RBP13.33□□□□□ -0.28
SPARC-206ENST00000524277 TOB2Q14106 344 aaPredicted RBP13.33□□□□□ -0.28
SPARC-206ENST00000524277 TARBP2Q15633 366 aaKnown RBP13.33□□□□□ -0.28
SPARC-206ENST00000524277 CLUL1Q15846 466 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 TMEM184AQ6ZMB5 413 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 KRT25Q7Z3Z0 450 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 ECHDC2Q86YB7 292 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 LRRC71Q8N4P6 559 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 MFSD14AQ96MC6 490 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 MBOAT7Q96N66 472 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 ZNF558Q96NG5 402 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 SCLT1Q96NL6 688 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 CASD1Q96PB1 797 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 PPP1R16BQ96T49 567 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 NAP1L4Q99733 375 aaKnown RBP13.33□□□□□ -0.28
SPARC-206ENST00000524277 TRAIPQ9BWF2 469 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 MRPL9Q9BYD2 267 aaKnown RBP13.33□□□□□ -0.28
SPARC-206ENST00000524277 GCOM2Q9BZD3 368 aaPredicted RBP13.33□□□□□ -0.28
SPARC-206ENST00000524277 UNC45AQ9H3U1 944 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 NCOA5Q9HCD5 579 aaKnown RBP13.33□□□□□ -0.28
SPARC-206ENST00000524277 PPME1Q9Y570 386 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 PIEZO1Q92508 2521 aa13.33□□□□□ -0.28
SPARC-206ENST00000524277 IGKV6-21A0A0C4DH24 114 aa13.32□□□□□ -0.28
SPARC-206ENST00000524277 M0R2N6 131 aa13.32□□□□□ -0.28
SPARC-206ENST00000524277 CHMP2AO43633 222 aa13.32□□□□□ -0.28
SPARC-206ENST00000524277 FGFR1P11362 822 aa13.32□□□□□ -0.28
SPARC-206ENST00000524277 HOXB8P17481 243 aaPredicted RBP13.32□□□□□ -0.28
SPARC-206ENST00000524277 HOXD11P31277 338 aaPredicted RBP13.32□□□□□ -0.28
SPARC-206ENST00000524277 NONOQ15233 471 aaKnown RBP eCLIP13.32□□□□□ -0.28
SPARC-206ENST00000524277 DUSP6Q16828 381 aa13.32□□□□□ -0.28
SPARC-206ENST00000524277 KCNT2Q6UVM3 1135 aa13.32□□□□□ -0.28
SPARC-206ENST00000524277 B3GNT9Q6UX72 402 aa13.32□□□□□ -0.28
SPARC-206ENST00000524277 RBM23Q86U06 439 aaKnown RBP13.32□□□□□ -0.28
SPARC-206ENST00000524277 ZNF410Q86VK4 478 aa13.32□□□□□ -0.28
SPARC-206ENST00000524277 RNF135Q8IUD6 432 aa13.32□□□□□ -0.28
SPARC-206ENST00000524277 NLRP7Q8WX94 980 aa13.32□□□□□ -0.28
SPARC-206ENST00000524277 FAM20AQ96MK3 541 aa13.32□□□□□ -0.28
SPARC-206ENST00000524277 SPG21Q9NZD8 308 aa13.32□□□□□ -0.28
SPARC-206ENST00000524277 LOC730098B7Z3J9 87 aa13.31□□□□□ -0.28
SPARC-206ENST00000524277 CSPG5O95196 566 aa13.31□□□□□ -0.28
SPARC-206ENST00000524277 GCFC2P16383 781 aaKnown RBP13.31□□□□□ -0.28
SPARC-206ENST00000524277 SFPQP23246 707 aaKnown RBP eCLIP13.31□□□□□ -0.28
SPARC-206ENST00000524277 ERVFC1P60507 584 aa13.31□□□□□ -0.28
SPARC-206ENST00000524277 PSMC5P62195 406 aa13.31□□□□□ -0.28
SPARC-206ENST00000524277 CBX2Q14781 532 aaPredicted RBP13.31□□□□□ -0.28
SPARC-206ENST00000524277 ETNPPLQ8TBG4 499 aa13.31□□□□□ -0.28
SPARC-206ENST00000524277 EDAQ92838 391 aa13.31□□□□□ -0.28
SPARC-206ENST00000524277 PHF7Q9BWX1 381 aaPredicted RBP13.31□□□□□ -0.28
SPARC-206ENST00000524277 PDRG1Q9NUG6 133 aa13.31□□□□□ -0.28
SPARC-206ENST00000524277 STK39Q9UEW8 545 aa13.31□□□□□ -0.28
SPARC-206ENST00000524277 SEPT9Q9UHD8 586 aaPredicted RBP13.31□□□□□ -0.28
SPARC-206ENST00000524277 FNDC1Q4ZHG4 1894 aaPredicted RBP13.31□□□□□ -0.28
SPARC-206ENST00000524277 MUC6Q6W4X9 2439 aa13.31□□□□□ -0.28
SPARC-206ENST00000524277 CCDC194A0A1B0GVG4 234 aa13.3□□□□□ -0.28
SPARC-206ENST00000524277 TBX3O15119 743 aa13.3□□□□□ -0.28
SPARC-206ENST00000524277 MAFO75444 373 aaPredicted RBP13.3□□□□□ -0.28
SPARC-206ENST00000524277 GLP2RO95838 553 aa13.3□□□□□ -0.28
SPARC-206ENST00000524277 ALDH7A1P49419 539 aaKnown RBP13.3□□□□□ -0.28
SPARC-206ENST00000524277 RAB27AP51159 221 aa13.3□□□□□ -0.28
SPARC-206ENST00000524277 UGCGQ16739 394 aa13.3□□□□□ -0.28
SPARC-206ENST00000524277 MTERF2Q49AM1 385 aa13.3□□□□□ -0.28
SPARC-206ENST00000524277 PPP4R3AQ6IN85 833 aa13.3□□□□□ -0.28
SPARC-206ENST00000524277 BMP8AQ7Z5Y6 402 aa13.3□□□□□ -0.28
SPARC-206ENST00000524277 ZNF598Q86UK7 904 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms