RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 BMP15O95972 392 aa13.33□□□□□ -0.28
CLN8-207ENST00000524258 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
CLN8-207ENST00000524258 NASPP49321 788 aaPredicted RBP13.33□□□□□ -0.28
CLN8-207ENST00000524258 HTRA4P83105 476 aaPredicted RBP13.33□□□□□ -0.28
CLN8-207ENST00000524258 SLC39A14Q15043 492 aa13.33□□□□□ -0.28
CLN8-207ENST00000524258 TMEM119Q4V9L6 283 aa13.33□□□□□ -0.28
CLN8-207ENST00000524258 Q7L0L9 218 aa13.33□□□□□ -0.28
CLN8-207ENST00000524258 ERMNQ8TAM6 284 aa13.33□□□□□ -0.28
CLN8-207ENST00000524258 SNX29Q8TEQ0 813 aa13.33□□□□□ -0.28
CLN8-207ENST00000524258 SLC7A3Q8WY07 619 aa13.33□□□□□ -0.28
CLN8-207ENST00000524258 JPH2Q9BR39 696 aaPredicted RBP13.33□□□□□ -0.28
CLN8-207ENST00000524258 FDXACB1Q9BRP7 624 aaPredicted RBP13.33□□□□□ -0.28
CLN8-207ENST00000524258 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
CLN8-207ENST00000524258 SEMA6BQ9H3T3 888 aa13.33□□□□□ -0.28
CLN8-207ENST00000524258 RC3H2Q9HBD1 1191 aaKnown RBP13.33□□□□□ -0.28
CLN8-207ENST00000524258 KIAA1024Q9UPX6 916 aa13.33□□□□□ -0.28
CLN8-207ENST00000524258 PCDHA11Q9Y5I1 949 aa13.33□□□□□ -0.28
CLN8-207ENST00000524258 TTC3P53804 2025 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 COL4A6Q14031 1691 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 M0QZ92 97 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 CSDE1O75534 798 aaKnown RBP13.32□□□□□ -0.28
CLN8-207ENST00000524258 RPS6KA5O75582 802 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 DGAT1O75907 488 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 BRD1O95696 1058 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 F13A1P00488 732 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 PDIA4P13667 645 aaKnown RBP13.32□□□□□ -0.28
CLN8-207ENST00000524258 CYP11B2P19099 503 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 DDIT3P35638 169 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 POLGP54098 1239 aaPredicted RBP13.32□□□□□ -0.28
CLN8-207ENST00000524258 FAM189BP81408 668 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 CDC42EP1Q00587 391 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 LAMTOR4Q0VGL1 99 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 HAUS3Q68CZ6 603 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 FAM43BQ6ZT52 329 aaPredicted RBP13.32□□□□□ -0.28
CLN8-207ENST00000524258 USP49Q70CQ1 688 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 ZNF410Q86VK4 478 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 IFNLR1Q8IU57 520 aaPredicted RBP13.32□□□□□ -0.28
CLN8-207ENST00000524258 EXOC8Q8IYI6 725 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 LINC00301Q8NCQ3 95 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 ASAP3Q8TDY4 903 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 AK8Q96MA6 479 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 RAB34Q9BZG1 259 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 MINDY3Q9H8M7 445 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
CLN8-207ENST00000524258 DDX19AQ9NUU7 478 aaKnown RBP13.32□□□□□ -0.28
CLN8-207ENST00000524258 MTMR10Q9NXD2 777 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 GINS2Q9Y248 185 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 SRPRBQ9Y5M8 271 aaKnown RBP13.32□□□□□ -0.28
CLN8-207ENST00000524258 COL4A3BPQ9Y5P4 624 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 STK24Q9Y6E0 443 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 TRANK1O15050 2925 aa13.32□□□□□ -0.28
CLN8-207ENST00000524258 LOXHD1Q8IVV2 1947 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 TMEM265A0A087WTH1 108 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 LCHNA4D1U4 455 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 C9IYK1 514 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 E9PMD0 336 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 EYA4O95677 639 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 LINC00271P0C7V0 271 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 FGFR4P22455 802 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 GLRA2P23416 452 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 MARCKSP29966 332 aaPredicted RBP13.31□□□□□ -0.28
CLN8-207ENST00000524258 LONP1P36776 959 aaKnown RBP13.31□□□□□ -0.28
CLN8-207ENST00000524258 KCNJ6P48051 423 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 DNM2P50570 870 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 POU5F1BQ06416 359 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 PAK2Q13177 524 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 KRT79Q5XKE5 535 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 PADI6Q6TGC4 694 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 SPRED2Q7Z698 418 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 RHPN2Q8IUC4 686 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 DAW1Q8N136 415 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
CLN8-207ENST00000524258 PSPC1Q8WXF1 523 aaKnown RBP13.31□□□□□ -0.28
CLN8-207ENST00000524258 TIFAQ96CG3 184 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 MTRQ99707 1265 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 FTHL17Q9BXU8 183 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 NKX2-4Q9H2Z4 354 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 ATP6V0A4Q9HBG4 840 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 GPRC5CQ9NQ84 441 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 RGS18Q9NS28 235 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 TFIP11Q9UBB9 837 aaKnown RBP13.31□□□□□ -0.28
CLN8-207ENST00000524258 ARID2Q68CP9 1835 aa13.31□□□□□ -0.28
CLN8-207ENST00000524258 GPR182O15218 404 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 ASAP2O43150 1006 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 SLC26A4O43511 780 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 USO1O60763 962 aaKnown RBP13.3□□□□□ -0.28
CLN8-207ENST00000524258 PTENP60484 403 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 MAPK7Q13164 816 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 CAPSQ13938 189 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 RAB30Q15771 203 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 FOXD4L5Q5VV16 416 aaPredicted RBP13.3□□□□□ -0.28
CLN8-207ENST00000524258 C1orf186Q6ZWK4 172 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 KCTD17Q8N5Z5 321 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 DEFB123Q8N688 67 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 TCP11Q8WWU5 503 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 FOXD4L4Q8WXT5 416 aaPredicted RBP13.3□□□□□ -0.28
CLN8-207ENST00000524258 BSNDQ8WZ55 320 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 ZNF689Q96CS4 500 aaPredicted RBP13.3□□□□□ -0.28
CLN8-207ENST00000524258 GUCD1Q96NT3 240 aa13.3□□□□□ -0.28
CLN8-207ENST00000524258 CLIC6Q96NY7 704 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms