RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 FGFR4P22455 802 aa21.18■□□□□ 0.98
PTP4A3-206ENST00000524028 NDUFV1P49821 464 aa21.18■□□□□ 0.98
PTP4A3-206ENST00000524028 ERVFC1P60507 584 aa21.18■□□□□ 0.98
PTP4A3-206ENST00000524028 DRP2Q13474 957 aa21.18■□□□□ 0.98
PTP4A3-206ENST00000524028 MIER3Q7Z3K6 550 aa21.18■□□□□ 0.98
PTP4A3-206ENST00000524028 ETNPPLQ8TBG4 499 aa21.18■□□□□ 0.98
PTP4A3-206ENST00000524028 PPP2R3CQ969Q6 453 aa21.18■□□□□ 0.98
PTP4A3-206ENST00000524028 CASD1Q96PB1 797 aa21.18■□□□□ 0.98
PTP4A3-206ENST00000524028 SH2D3AQ9BRG2 576 aa21.18■□□□□ 0.98
PTP4A3-206ENST00000524028 C22orf23Q9BZE7 217 aa21.18■□□□□ 0.98
PTP4A3-206ENST00000524028 AAASQ9NRG9 546 aa21.18■□□□□ 0.98
PTP4A3-206ENST00000524028 PDRG1Q9NUG6 133 aa21.18■□□□□ 0.98
PTP4A3-206ENST00000524028 DTNBO60941 627 aa21.17■□□□□ 0.98
PTP4A3-206ENST00000524028 GLP2RO95838 553 aa21.17■□□□□ 0.98
PTP4A3-206ENST00000524028 DARSP14868 501 aaKnown RBP21.17■□□□□ 0.98
PTP4A3-206ENST00000524028 UBE3AQ05086 875 aa21.17■□□□□ 0.98
PTP4A3-206ENST00000524028 RDM1Q8NG50 284 aa21.17■□□□□ 0.98
PTP4A3-206ENST00000524028 NIFKQ9BYG3 293 aaKnown RBP21.17■□□□□ 0.98
PTP4A3-206ENST00000524028 KCNJ14Q9UNX9 436 aa21.17■□□□□ 0.98
PTP4A3-206ENST00000524028 MYH9P35579 1960 aaKnown RBP21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 FNDC1Q4ZHG4 1894 aaPredicted RBP21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 PRR33A8MZF0 331 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 PER2O15055 1255 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 DCXO43602 365 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 CSDE1O75534 798 aaKnown RBP21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 EYA4O95677 639 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 RBM10P98175 930 aaKnown RBP21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 TBC1D8BQ0IIM8 1120 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 ECHDC2Q86YB7 292 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 THNSL1Q8IYQ7 743 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 ZNF710Q8N1W2 664 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 MICAL1Q8TDZ2 1067 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 FAM122AQ96E09 287 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 TMEM117Q9H0C3 514 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 TLR9Q9NR96 1032 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 BARX2Q9UMQ3 279 aaPredicted RBP21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 HCN4Q9Y3Q4 1203 aa21.16■□□□□ 0.98
PTP4A3-206ENST00000524028 PLXNA4Q9HCM2 1894 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 FSCN2O14926 492 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 SLC37A4O43826 429 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 ZSCAN20P17040 1043 aaPredicted RBP21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 SCRN1Q12765 414 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 COASYQ13057 564 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 NONOQ15233 471 aaKnown RBP eCLIP21.15■□□□□ 0.985e-7■■■■□ 22.3
PTP4A3-206ENST00000524028 INF2Q27J81 1249 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 MTERF2Q49AM1 385 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 XKR3Q5GH77 459 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 GALNT17Q6IS24 598 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 MOXD1Q6UVY6 613 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 VN1R2Q8NFZ6 395 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 NLRP7Q8WX94 980 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 TLE6Q9H808 572 aa21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 SEPT9Q9UHD8 586 aaPredicted RBP21.15■□□□□ 0.98
PTP4A3-206ENST00000524028 IGKV6-21A0A0C4DH24 114 aa21.14■□□□□ 0.97
PTP4A3-206ENST00000524028 LAG3P18627 525 aa21.14■□□□□ 0.97
PTP4A3-206ENST00000524028 PBX3P40426 434 aa21.14■□□□□ 0.97
PTP4A3-206ENST00000524028 CPLX2Q6PUV4 134 aaKnown RBP21.14■□□□□ 0.97
PTP4A3-206ENST00000524028 FAM177A1Q8N128 213 aaPredicted RBP21.14■□□□□ 0.97
PTP4A3-206ENST00000524028 SMRP1Q8NCR6 262 aa21.14■□□□□ 0.97
PTP4A3-206ENST00000524028 SCLT1Q96NL6 688 aa21.14■□□□□ 0.97
PTP4A3-206ENST00000524028 PHF20Q9BVI0 1012 aa21.14■□□□□ 0.97
PTP4A3-206ENST00000524028 GJB4Q9NTQ9 266 aa21.14■□□□□ 0.97
PTP4A3-206ENST00000524028 DDX25Q9UHL0 483 aaKnown RBP21.14■□□□□ 0.97
PTP4A3-206ENST00000524028 ARIH1Q9Y4X5 557 aaPredicted RBP21.14■□□□□ 0.97
PTP4A3-206ENST00000524028 C5orf42Q9H799 3197 aa21.14■□□□□ 0.97
PTP4A3-206ENST00000524028 A0A0U1RQF3 1178 aa21.13■□□□□ 0.97
PTP4A3-206ENST00000524028 EML1O00423 815 aa21.13■□□□□ 0.97
PTP4A3-206ENST00000524028 ATF7P17544 494 aaPredicted RBP21.13■□□□□ 0.97
PTP4A3-206ENST00000524028 PLCB3Q01970 1234 aa21.13■□□□□ 0.97
PTP4A3-206ENST00000524028 CSPP1Q1MSJ5 1256 aa21.13■□□□□ 0.97
PTP4A3-206ENST00000524028 CLLU1OSQ5K130 101 aa21.13■□□□□ 0.97
PTP4A3-206ENST00000524028 KRT25Q7Z3Z0 450 aa21.13■□□□□ 0.97
PTP4A3-206ENST00000524028 ZNF598Q86UK7 904 aaKnown RBP21.13■□□□□ 0.97
PTP4A3-206ENST00000524028 RNF169Q8NCN4 708 aa21.13■□□□□ 0.97
PTP4A3-206ENST00000524028 TPCN1Q9ULQ1 816 aa21.13■□□□□ 0.97
PTP4A3-206ENST00000524028 DDX11L8A8MPP1 907 aa21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 HOXA2O43364 376 aa21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 DUSP6Q16828 381 aa21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 LETM2Q2VYF4 491 aa21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 KCNT2Q6UVM3 1135 aa21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 ANO5Q75V66 913 aa21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 RNF135Q8IUD6 432 aa21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 MRPS27Q92552 414 aaKnown RBP21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 POP1Q99575 1024 aaKnown RBP21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 MUTYHQ9UIF7 546 aa21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 VAV3Q9UKW4 847 aa21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 LZTS1Q9Y250 596 aa21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 WDR81Q562E7 1941 aa21.12■□□□□ 0.97
PTP4A3-206ENST00000524028 A0A087WZ62 844 aa21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 MAFO75444 373 aaPredicted RBP21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 CTDNEP1O95476 244 aa21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 PSMC5P62195 406 aa21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 PLA2G4FQ68DD2 849 aa21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 PDE12Q6L8Q7 609 aaKnown RBP21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 ABI1Q8IZP0 508 aa21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 LRRC43Q8N309 656 aa21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 OXER1Q8TDS5 423 aa21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 FDXACB1Q9BRP7 624 aaPredicted RBP21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 GCOM2Q9BZD3 368 aaPredicted RBP21.11■□□□□ 0.97
PTP4A3-206ENST00000524028 KCNMB3Q9NPA1 279 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms