RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	EXOC3	O60645	756 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	CTAGE8	P0CG41	777 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	MAPT	P10636	758 aa	Known RBP	11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	YWHAB	P31946	246 aa	Known RBP	11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	ZNF131	P52739	623 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	SMTN	P53814	917 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	MYL7	Q01449	175 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	KLHL30	Q0D2K2	578 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	DMP1	Q13316	513 aa	Predicted RBP	11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	ITGB3BP	Q13352	177 aa	Predicted RBP	11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	NFIL3	Q16649	462 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	ERCC6L	Q2NKX8	1250 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	WDR59	Q6PJI9	974 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	ZNF662	Q6ZS27	426 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	CTAGE6	Q86UF2	777 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	CTAGE4	Q8IX94	777 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	C2orf69	Q8N8R5	385 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	CRACR2A	Q9BSW2	395 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	CCDC94	Q9BW85	323 aa	Predicted RBP	11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	ANKEF1	Q9NU02	776 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	PCDHA13	Q9Y5I0	950 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	MCM3AP	O60318	1980 aa		11.78	□□□□□ -0.52
SPIDR-222	ENST00000524006	ANO9	A1A5B4	782 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006		H0YCG3	227 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	TULP1	O00294	542 aa	Predicted RBP	11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	BACH1	O14867	736 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	LYPLA2	O95372	231 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	NR3C2	P08235	984 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	CCDC172	P0C7W6	258 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	PLS3	P13797	630 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	ABCD1	P33897	745 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	ARHGAP25	P42331	645 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	MAGEA1	P43355	309 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	ZNF157	P51786	506 aa	Predicted RBP	11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	MRPS9	P82933	396 aa	Known RBP	11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	ARID5A	Q03989	594 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	FAM102B	Q5T8I3	360 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	MIS18BP1	Q6P0N0	1132 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	TMCO3	Q6UWJ1	677 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	CATSPERG	Q6ZRH7	1159 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	MAEA	Q7L5Y9	396 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	SRGAP1	Q7Z6B7	1085 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	C4orf19	Q8IY42	314 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	ANKRD35	Q8N283	1001 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	CHST13	Q8NET6	341 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	TRIM58	Q8NG06	486 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	RABGGTA	Q92696	567 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	CCDC102A	Q96A19	550 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	HVCN1	Q96D96	273 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	JPH1	Q9HDC5	661 aa	Predicted RBP	11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	PLCB1	Q9NQ66	1216 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	MYO6	Q9UM54	1294 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	DAAM1	Q9Y4D1	1078 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	BZW2	Q9Y6E2	419 aa	Known RBP	11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	ZMYM2	Q9UBW7	1377 aa		11.77	□□□□□ -0.53
SPIDR-222	ENST00000524006	GTPBP10	A4D1E9	387 aa	Known RBP	11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	CCDC169	A6NNP5	214 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	ATP2A1	O14983	1001 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	ERLIN1	O75477	346 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	SLC10A3	P09131	477 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	COPB2	P35606	906 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	RARRES1	P49788	294 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	CYP27A1	Q02318	531 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	SP4	Q02446	784 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	VGLL4	Q14135	290 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	PPP2R5A	Q15172	486 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	ENOX2	Q16206	610 aa	Known RBP	11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	IFI16	Q16666	785 aa	Known RBP	11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	B3GNT9	Q6UX72	402 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	ZNF720	Q7Z2F6	126 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	USP37	Q86T82	979 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	GPR161	Q8N6U8	529 aa	Known RBP	11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	BAP1	Q92560	729 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	KIFAP3	Q92845	792 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	CDCA5	Q96FF9	252 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	IFT74	Q96LB3	600 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	NOX5	Q96PH1	765 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	IRX2	Q9BZI1	471 aa	Predicted RBP	11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	AGPAT3	Q9NRZ7	376 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	RNF186	Q9NXI6	227 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	SAGE1	Q9NXZ1	904 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	PUF60	Q9UHX1	559 aa	Known RBP	11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	REXO2	Q9Y3B8	237 aa	Known RBP	11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	PCDHA10	Q9Y5I2	948 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	NFASC	O94856	1347 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	PDE4DIP	Q5VU43	2346 aa		11.76	□□□□□ -0.53
SPIDR-222	ENST00000524006	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	EPHB6	O15197	1021 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	TRPA1	O75762	1119 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	AKAP3	O75969	853 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	FER	P16591	822 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	RFX1	P22670	979 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	MCM3	P25205	808 aa		11.75	□□□□□ -0.53
SPIDR-222	ENST00000524006	ANXA13	P27216	316 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms