RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 NFATC3Q12968 1075 aa6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 TUSC3Q13454 348 aa6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 UTP14CQ5TAP6 766 aaKnown RBP6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 OTUD6AQ7L8S5 288 aa6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 SMAP1Q8IYB5 467 aaPredicted RBP6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 DTX3Q8N9I9 347 aa6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 MIGA1Q8NAN2 632 aa6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 NUDT10Q8NFP7 164 aa6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 NUDT11Q96G61 164 aa6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 POLR3CQ9BUI4 534 aaPredicted RBP6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 PPCSQ9HAB8 311 aa6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 DLL4Q9NR61 685 aa6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 HDAC9Q9UKV0 1011 aa6.67□□□□□ -1.34
EFCAB13-213ENST00000523978 BLACEA4D250 179 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 NPEPPSL1A6NEC2 478 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 FGFR1P11362 822 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 COL6A2P12110 1019 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 PPP2CBP62714 309 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 PPP2CAP67775 309 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 MORC3Q14149 939 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 CDSNQ15517 529 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 NFE2Q16621 373 aaPredicted RBP6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 GRAMD1BQ3KR37 738 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 LBX2Q6XYB7 198 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 ARHGEF18Q6ZSZ5 1173 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 SKAP1Q86WV1 359 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 RAVER1Q8IY67 606 aaKnown RBP6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 ARL6IP6Q8N6S5 226 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 UHMK1Q8TAS1 419 aaKnown RBP6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 DCAF4Q8WV16 495 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 OSBP2Q969R2 916 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 PAWRQ96IZ0 340 aaKnown RBP6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 KCNJ15Q99712 375 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 PTPN18Q99952 460 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 BARX1Q9HBU1 254 aaPredicted RBP6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 EVLQ9UI08 416 aaPredicted RBP6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 TELO2Q9Y4R8 837 aa6.66□□□□□ -1.34
EFCAB13-213ENST00000523978 KAT6BQ8WYB5 2073 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 NKRFO15226 690 aaKnown RBP eCLIP6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 B4GALT4O60513 344 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 DIAPH1O60610 1272 aaKnown RBP6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 GNAT1P11488 350 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 PABPC1P11940 636 aaKnown RBP6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 FAHP16930 419 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 TSPAN7P41732 249 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 TMED1Q13445 227 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 KIZQ2M2Z5 673 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 PAN2Q504Q3 1202 aaKnown RBP6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 CCDC158Q5M9N0 1113 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 HYIQ5T013 277 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 ARHGEF25Q86VW2 580 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 CIR1Q86X95 450 aaPredicted RBP6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 BRSK2Q8IWQ3 736 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 E2F7Q96AV8 911 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 CCDC34Q96HJ3 373 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 CCDC94Q9BW85 323 aaPredicted RBP6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 CD248Q9HCU0 757 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 PGAP2Q9UHJ9 254 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 ZDHHC9Q9Y397 364 aa6.65□□□□□ -1.34
EFCAB13-213ENST00000523978 IQCA1LA6NCM1 817 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 FIBPO43427 364 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 AKAP8O43823 692 aaKnown RBP6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 KLHL18O94889 574 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 RAPGEF3O95398 923 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 CKMP06732 381 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 SKIDA1Q1XH10 827 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 HABP4Q5JVS0 413 aaKnown RBP6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 YOD1Q5VVQ6 348 aaPredicted RBP6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 NSMFQ6X4W1 530 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 SPRED1Q7Z699 444 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 TTC30AQ86WT1 665 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 DNERQ8NFT8 737 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 SH3RF3Q8TEJ3 882 aaPredicted RBP6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 KISS1RQ969F8 398 aaPredicted RBP6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 ZNF496Q96IT1 587 aaPredicted RBP6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 ZFYVE21Q9BQ24 234 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 PDGFDQ9GZP0 370 aaPredicted RBP6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 KLC2Q9H0B6 622 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 MEGF9Q9H1U4 602 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 KMT5AQ9NQR1 393 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 UTP6Q9NYH9 597 aaKnown RBP6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 SUN2Q9UH99 717 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 ADAM29Q9UKF5 820 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 TSC22D4Q9Y3Q8 395 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 IKBKGQ9Y6K9 419 aa6.64□□□□□ -1.35
EFCAB13-213ENST00000523978 FAM170AA1A519 330 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 GTPBP10A4D1E9 387 aaKnown RBP6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 CTAGE5O15320 804 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 KNG1P01042 644 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 SRGNP10124 158 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 GLRBP48167 497 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 GEMIN4P57678 1058 aaKnown RBP6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 GPR85P60893 370 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 SPIRE1Q08AE8 756 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 E2F5Q15329 346 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 SMAD2Q15796 467 aaKnown RBP6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 CD276Q5ZPR3 534 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 STYK1Q6J9G0 422 aa6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.63□□□□□ -1.35
EFCAB13-213ENST00000523978 MYO1HQ8N1T3 1032 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms