RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 EHD4Q9H223 541 aa14.11□□□□□ -0.15
PCDHGB1-201ENST00000523390 SNX25Q9H3E2 840 aa14.11□□□□□ -0.15
PCDHGB1-201ENST00000523390 KCNH7Q9NS40 1196 aa14.11□□□□□ -0.15
PCDHGB1-201ENST00000523390 PASKQ96RG2 1323 aa14.11□□□□□ -0.15
PCDHGB1-201ENST00000523390 MYL3P08590 195 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 ATF2P15336 505 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 NPEPPSP55786 919 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 EVX2Q03828 476 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 SURF1Q15526 300 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 CATSPER3Q86XQ3 398 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 ANKRD42Q8N9B4 389 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 MTFR1LQ9H019 292 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 AGPAT5Q9NUQ2 364 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 H7C0C1 242 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 MSH4O15457 936 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 ATP5OP48047 213 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 SGO2Q562F6 1265 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 NBPF12Q5TAG4 269 aaPredicted RBP14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 OR6B2Q6IFH4 312 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 TMEM270Q6UE05 265 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 TMEM143Q96AN5 459 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 MRPL47Q9HD33 250 aaKnown RBP14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 PLTPP55058 493 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 DYNLT1P63172 113 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 NR1I3Q14994 352 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 E4F1Q66K89 784 aaPredicted RBP14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 KCTD16Q68DU8 428 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 ILDR1Q86SU0 546 aaPredicted RBP14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 KSR1Q8IVT5 923 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 MICALL1Q8N3F8 863 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 RIOX1Q9H6W3 641 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 CAPN11Q9UMQ6 739 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 PPP1R3GB7ZBB8 358 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 SLURP2P0DP57 97 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 CLCN6P51797 869 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 CROCCP2Q86T23 111 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 GLYCTKQ8IVS8 523 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 FAM163AQ96GL9 167 aaPredicted RBP14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 HEXIM2Q96MH2 286 aaKnown RBP14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 KIAA1586Q9HCI6 787 aa14.1□□□□□ -0.15
PCDHGB1-201ENST00000523390 PHKA2P46019 1235 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 MYO1EQ12965 1108 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 HDAC6Q9UBN7 1215 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 LRRD1A4D1F6 860 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 ZBTB22O15209 634 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 GRB10Q13322 594 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 KRT39Q6A163 491 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 TAOK1Q7L7X3 1001 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 AKT1S1Q96B36 256 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 WDR24Q96S15 920 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 CALN1Q9BXU9 219 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 CNOT8Q9UFF9 292 aaKnown RBP14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 KIF13AQ9H1H9 1805 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 MRC1P22897 1456 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 CCDC151A5D8V7 595 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 NCK2O43639 380 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 KRT1P04264 644 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 PPM1FP49593 454 aaPredicted RBP14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 ITIH3Q06033 890 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 FRMD5Q7Z6J6 570 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 SCYL3Q8IZE3 742 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 RNF149Q8NC42 400 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 ADAM22Q9P0K1 906 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 TMX2Q9Y320 296 aa14.09□□□□□ -0.15
PCDHGB1-201ENST00000523390 STAMBPO95630 424 aa14.08□□□□□ -0.15
PCDHGB1-201ENST00000523390 ACTN1P12814 892 aa14.08□□□□□ -0.15
PCDHGB1-201ENST00000523390 CD44P16070 742 aaKnown RBP14.08□□□□□ -0.15
PCDHGB1-201ENST00000523390 XKR3Q5GH77 459 aa14.08□□□□□ -0.15
PCDHGB1-201ENST00000523390 PDXDC1Q6P996 788 aa14.08□□□□□ -0.15
PCDHGB1-201ENST00000523390 PALM2Q8IXS6 379 aa14.08□□□□□ -0.15
PCDHGB1-201ENST00000523390 RPUSD2Q8IZ73 545 aaKnown RBP14.08□□□□□ -0.15
PCDHGB1-201ENST00000523390 ABI1Q8IZP0 508 aa14.08□□□□□ -0.15
PCDHGB1-201ENST00000523390 PBKQ96KB5 322 aa14.08□□□□□ -0.15
PCDHGB1-201ENST00000523390 AGO2Q9UKV8 859 aaKnown RBP14.08□□□□□ -0.15
PCDHGB1-201ENST00000523390 HHATQ5VTY9 493 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 RFX6Q8HWS3 928 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 NME8Q8N427 588 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 RIT2Q99578 217 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 C11orf70Q9BRQ4 267 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 TRIM7Q9C029 511 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 RNF14Q9UBS8 474 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 ANAPC7Q9UJX3 599 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 DGAT1O75907 488 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 RHBDL3P58872 404 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 SLC30A10Q6XR72 485 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 MAP7D3Q8IWC1 876 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 RHOT2Q8IXI1 618 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 CERS5Q8N5B7 392 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 TC2NQ8N9U0 490 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 RBAKQ9NYW8 714 aaPredicted RBP14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 ODF2LQ9ULJ1 636 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 AKAP12Q02952 1782 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 EIF3CLB5ME19 914 aaKnown RBP14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 CYTH3O43739 400 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 FGGP02679 453 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 VEGFAP15692 232 aaPredicted RBP14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 ZNF699Q32M78 642 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 ERICH1Q86X53 443 aa14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 EIF3CQ99613 913 aaKnown RBP14.08□□□□□ -0.16
PCDHGB1-201ENST00000523390 EPC1Q9H2F5 836 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms