RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ZFATQ9P243 1243 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 MYH15Q9Y2K3 1946 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 AFDNP55196 1824 aaKnown RBP9.73□□□□□ -0.85
CSMD1-212ENST00000523387 SPATA31A3Q5VYP0 1347 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 CYP19A1P11511 503 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-212ENST00000523387 SPRED3Q2MJR0 410 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 ERP27Q96DN0 273 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 CARD10Q9BWT7 1032 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 SPZ1Q9BXG8 430 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 BLOC1S4Q9NUP1 217 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 MAD2L2Q9UI95 211 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 RGPD8O14715 1765 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-212ENST00000523387 USP17L5A8MUK1 530 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 F8W031 263 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 MAPK13O15264 365 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 SLC37A4O43826 429 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 TROVE2P10155 538 aaKnown RBP eCLIP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 CTNNA2P26232 953 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 PSMC2P35998 433 aaKnown RBP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 KCNJ1P48048 391 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 MAPK7Q13164 816 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 KNOP1Q1ED39 458 aaKnown RBP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 ANKRD20A2Q5SQ80 823 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 ANKRD20A1Q5TYW2 823 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 ANKRD20A3Q5VUR7 823 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 LONP2Q86WA8 852 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 ERICH1Q86X53 443 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 TRIM59Q8IWR1 403 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 SCYL3Q8IZE3 742 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 SH3RF3Q8TEJ3 882 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 C18orf8Q96DM3 657 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 NAF1Q96HR8 494 aaKnown RBP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 FAM84BQ96KN1 310 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 TOPAZ1Q8N9V7 1692 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 POTEFA5A3E0 1075 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 SFI1A8K8P3 1242 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 MIF4GDA9UHW6 222 aaKnown RBP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 CES2O00748 559 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 POTEIP0CG38 1075 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 SKIP12755 728 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 RWDD2BP57060 319 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 MYL7Q01449 175 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 PDIA5Q14554 519 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 ZNF746Q6NUN9 644 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 CCDC62Q6P9F0 684 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 POTEGQ6S5H5 508 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 POTEEQ6S8J3 1075 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 ZC3H18Q86VM9 953 aaKnown RBP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 SLF2Q8IX21 1173 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 RHOT2Q8IXI1 618 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 SLC17A8Q8NDX2 589 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 RPGRQ92834 1020 aaKnown RBP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 TYW1Q9NV66 732 aaKnown RBP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 ANAPC5Q9UJX4 755 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 NFAT5O94916 1531 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 CCDC160A6NGH7 325 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 RASA4BC9J798 803 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 RASA4O43374 803 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 PHF2O75151 1096 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 SLC16A2P36021 539 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 SPICE1Q8N0Z3 855 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 CENPTQ96BT3 561 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 PNMA5Q96PV4 448 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 IRAK4Q9NWZ3 460 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 INTUQ9ULD6 942 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.72□□□□□ -0.85
CSMD1-212ENST00000523387 IKBKGQ9Y6K9 419 aa9.72□□□□□ -0.85
CSMD1-212ENST00000523387 PPIP5K2O43314 1243 aa9.71□□□□□ -0.85
CSMD1-212ENST00000523387 POTEJP0CG39 1038 aa9.71□□□□□ -0.85
CSMD1-212ENST00000523387 C12orf60Q5U649 245 aa9.71□□□□□ -0.85
CSMD1-212ENST00000523387 FRMD5Q7Z6J6 570 aa9.71□□□□□ -0.85
CSMD1-212ENST00000523387 CEP120Q8N960 986 aa9.71□□□□□ -0.85
CSMD1-212ENST00000523387 PGM2Q96G03 612 aa9.71□□□□□ -0.85
CSMD1-212ENST00000523387 NUDT12Q9BQG2 462 aa9.71□□□□□ -0.85
CSMD1-212ENST00000523387 CARD9Q9H257 536 aa9.71□□□□□ -0.85
CSMD1-212ENST00000523387 SNX3O60493 162 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 STAT3P40763 770 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 PTENP60484 403 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 KLC1Q07866 573 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 ORC2Q13416 577 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-212ENST00000523387 TMEM154Q6P9G4 183 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 EPM2AIP1Q7L775 607 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-212ENST00000523387 KCNK18Q7Z418 384 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 ZNF804AQ7Z570 1209 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 TPH2Q8IWU9 490 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 FBXO41Q8TF61 875 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 TEKT4Q8WW24 435 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 ZNF653Q96CK0 615 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 IQCGQ9H095 443 aaKnown RBP9.71□□□□□ -0.86
CSMD1-212ENST00000523387 USP40Q9NVE5 1235 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 MINPP1Q9UNW1 487 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 LTN1O94822 1766 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 SLIT3O75094 1523 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 N4BP2Q86UW6 1770 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-212ENST00000523387 C5orf60A6NFR6 353 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 RBAK-RBAKDNI3L0D1 243 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 PPFIA2O75334 1257 aa9.71□□□□□ -0.86
CSMD1-212ENST00000523387 ATP5HO75947 161 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms