RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 MRPL42Q9Y6G3 142 aaKnown RBP12.23□□□□□ -0.45
PVT1-216ENST00000523068 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.22□□□□□ -0.45
PVT1-216ENST00000523068 IGKV6-21A0A0C4DH24 114 aa12.22□□□□□ -0.45
PVT1-216ENST00000523068 HOXA2O43364 376 aa12.22□□□□□ -0.45
PVT1-216ENST00000523068 NCK2O43639 380 aa12.22□□□□□ -0.45
PVT1-216ENST00000523068 IBSPP21815 317 aaPredicted RBP12.22□□□□□ -0.45
PVT1-216ENST00000523068 FAM189BP81408 668 aa12.22□□□□□ -0.45
PVT1-216ENST00000523068 NR5A1Q13285 461 aa12.22□□□□□ -0.45
PVT1-216ENST00000523068 NLRP7Q8WX94 980 aa12.22□□□□□ -0.45
PVT1-216ENST00000523068 GCOM2Q9BZD3 368 aaPredicted RBP12.22□□□□□ -0.45
PVT1-216ENST00000523068 INO80BQ9C086 356 aaPredicted RBP12.22□□□□□ -0.45
PVT1-216ENST00000523068 ATP6V0A4Q9HBG4 840 aa12.22□□□□□ -0.45
PVT1-216ENST00000523068 AAASQ9NRG9 546 aa12.22□□□□□ -0.45
PVT1-216ENST00000523068 TMEM161AQ9NX61 479 aa12.22□□□□□ -0.45
PVT1-216ENST00000523068 LIMCH1Q9UPQ0 1083 aa12.22□□□□□ -0.45
PVT1-216ENST00000523068 PPME1Q9Y570 386 aa12.22□□□□□ -0.45
PVT1-216ENST00000523068 EML1O00423 815 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 DTNBO60941 627 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 MAFO75444 373 aaPredicted RBP12.21□□□□□ -0.45
PVT1-216ENST00000523068 STBD1O95210 358 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 DARSP14868 501 aaKnown RBP12.21□□□□□ -0.45
PVT1-216ENST00000523068 DSC3Q14574 896 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 EPHA7Q15375 998 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 SAFBQ15424 915 aaKnown RBP eCLIP12.21□□□□□ -0.45
PVT1-216ENST00000523068 CSPP1Q1MSJ5 1256 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 PUS10Q3MIT2 529 aaKnown RBP12.21□□□□□ -0.45
PVT1-216ENST00000523068 LEXMQ3ZCV2 418 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 TCEAL5Q5H9L2 206 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 SPOUT1Q5T280 376 aaKnown RBP12.21□□□□□ -0.45
PVT1-216ENST00000523068 ANO5Q75V66 913 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 OTUD6AQ7L8S5 288 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 ZNF410Q86VK4 478 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 DIS3L2Q8IYB7 885 aaKnown RBP12.21□□□□□ -0.45
PVT1-216ENST00000523068 SLC7A3Q8WY07 619 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 HAS1Q92839 578 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 TNFRSF25Q93038 417 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 PPP2R3CQ969Q6 453 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 PABPC5Q96DU9 382 aaKnown RBP12.21□□□□□ -0.45
PVT1-216ENST00000523068 CEP89Q96ST8 783 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 DACT1Q9NYF0 836 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 PLAGL2Q9UPG8 496 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 PCDHB12Q9Y5F1 795 aa12.21□□□□□ -0.45
PVT1-216ENST00000523068 MUC3AQ02505 3323 aa12.21□□□□□ -0.46
PVT1-216ENST00000523068 TMEM150BA6NC51 233 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 TBKBP1A7MCY6 615 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 BTBD18B2RXH4 712 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 GRM6O15303 877 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 JAK2O60674 1132 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 KCNA5P22460 613 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 SFPQP23246 707 aaKnown RBP eCLIP12.2□□□□□ -0.466e-6■■□□□ 14.5
PVT1-216ENST00000523068 POLGP54098 1239 aaPredicted RBP12.2□□□□□ -0.46
PVT1-216ENST00000523068 CALCRLQ16602 461 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 EARS2Q5JPH6 523 aaKnown RBP12.2□□□□□ -0.46
PVT1-216ENST00000523068 FAM102BQ5T8I3 360 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 NCAPH2Q6IBW4 605 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 RHPN2Q8IUC4 686 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 C4orf19Q8IY42 314 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 CEP170P1Q96L14 293 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 ZSCAN31Q96LW9 406 aaPredicted RBP12.2□□□□□ -0.46
PVT1-216ENST00000523068 SH2D3AQ9BRG2 576 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 LLPHQ9BRT6 129 aaKnown RBP12.2□□□□□ -0.46
PVT1-216ENST00000523068 LXNQ9BS40 222 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 ALG13Q9NP73 1137 aaKnown RBP12.2□□□□□ -0.46
PVT1-216ENST00000523068 CYP26B1Q9NR63 512 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 CHST12Q9NRB3 414 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 SUCLA2Q9P2R7 463 aaPredicted RBP12.2□□□□□ -0.46
PVT1-216ENST00000523068 PCDHA12Q9UN75 941 aa12.2□□□□□ -0.46
PVT1-216ENST00000523068 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 GAS2O43903 313 aaKnown RBP12.19□□□□□ -0.46
PVT1-216ENST00000523068 NEMFO60524 1076 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 EOMESO95936 686 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 ITGB1P05556 798 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 YWHABP31946 246 aaKnown RBP12.19□□□□□ -0.46
PVT1-216ENST00000523068 RFC5P40937 340 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 GATMP50440 423 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 HMGN5P82970 282 aaKnown RBP12.19□□□□□ -0.46
PVT1-216ENST00000523068 UBE3AQ05086 875 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 DRP2Q13474 957 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 COL19A1Q14993 1142 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 PLA2G4FQ68DD2 849 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 ABI1Q8IZP0 508 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 KLHL23Q8NBE8 558 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 SPPL3Q8TCT6 385 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 ZNF668Q96K58 619 aaPredicted RBP12.19□□□□□ -0.46
PVT1-216ENST00000523068 TMEM117Q9H0C3 514 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 ZSWIM4Q9H7M6 989 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 SH2B1Q9NRF2 756 aaPredicted RBP12.19□□□□□ -0.46
PVT1-216ENST00000523068 CLDND1Q9NY35 253 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 FAM50BQ9Y247 325 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 BRWD1Q9NSI6 2320 aa12.19□□□□□ -0.46
PVT1-216ENST00000523068 A0A087WZ62 844 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 A0A0U1RQF3 1178 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 FGFR1P11362 822 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 SKIP12755 728 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 LAG3P18627 525 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 FOSBP53539 338 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 SPIRE1Q08AE8 756 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 EP400NLQ6ZTU2 488 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 ECHDC2Q86YB7 292 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 CCDC83Q8IWF9 413 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms