RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TET1Q8NFU7 2136 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 TIGD1Q96MW7 591 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 RUSC1Q9BVN2 902 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 FAM49AQ9H0Q0 323 aaPredicted RBP13.26□□□□□ -0.29
PVT1-215ENST00000522963 MAGEF1Q9HAY2 307 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 KBTBD4Q9NVX7 518 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 TUBE1Q9UJT0 475 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.25□□□□□ -0.29
PVT1-215ENST00000522963 A0A1W2PPC1 479 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 MYMKA6NI61 221 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 RRN3P2A6NIE6 340 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 ZBBXA8MT70 800 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 FGBP02675 491 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 CASP1P29466 404 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 AFMP43652 599 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 ARSHQ5FYA8 562 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 TMEM240Q5SV17 173 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 RINT1Q6NUQ1 792 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 PSRC1Q6PGN9 363 aaPredicted RBP13.25□□□□□ -0.29
PVT1-215ENST00000522963 PADI6Q6TGC4 694 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 C1orf186Q6ZWK4 172 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 C16orf59Q7L2K0 433 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 CCDC43Q96MW1 224 aaKnown RBP13.25□□□□□ -0.29
PVT1-215ENST00000522963 TNMDQ9H2S6 317 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
PVT1-215ENST00000522963 TANC1Q9C0D5 1861 aa13.25□□□□□ -0.29
PVT1-215ENST00000522963 COL1A2P08123 1366 aa13.24□□□□□ -0.29
PVT1-215ENST00000522963 NPHP3-ACAD11A0A0J9YXS1 232 aa13.24□□□□□ -0.29
PVT1-215ENST00000522963 RSPH10B2B2RC85 870 aa13.24□□□□□ -0.29
PVT1-215ENST00000522963 USO1O60763 962 aaKnown RBP13.24□□□□□ -0.29
PVT1-215ENST00000522963 RSPH10BP0C881 870 aa13.24□□□□□ -0.29
PVT1-215ENST00000522963 HOXC8P31273 242 aa13.24□□□□□ -0.29
PVT1-215ENST00000522963 TRIM71Q2Q1W2 868 aaKnown RBP13.24□□□□□ -0.29
PVT1-215ENST00000522963 KLHL40Q2TBA0 621 aa13.24□□□□□ -0.29
PVT1-215ENST00000522963 MARCH8Q5T0T0 291 aa13.24□□□□□ -0.29
PVT1-215ENST00000522963 ELOA2Q8IYF1 753 aaPredicted RBP13.24□□□□□ -0.29
PVT1-215ENST00000522963 DNAJB3Q8WWF6 145 aa13.24□□□□□ -0.29
PVT1-215ENST00000522963 CLSTN2Q9H4D0 955 aa13.24□□□□□ -0.29
PVT1-215ENST00000522963 DHX33Q9H6R0 707 aaKnown RBP13.24□□□□□ -0.29
PVT1-215ENST00000522963 XPNPEP1Q9NQW7 623 aa13.24□□□□□ -0.29
PVT1-215ENST00000522963 PPME1Q9Y570 386 aa13.24□□□□□ -0.29
PVT1-215ENST00000522963 SOX1O00570 391 aaPredicted RBP13.23□□□□□ -0.29
PVT1-215ENST00000522963 TRAK2O60296 914 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 MAFO75444 373 aaPredicted RBP13.23□□□□□ -0.29
PVT1-215ENST00000522963 DGAT1O75907 488 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 C22orf31O95567 290 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 KLRC1P26715 233 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 RFC2P35250 354 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 RFC5P40937 340 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 ADAM17P78536 824 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 AMPD3Q01432 767 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 RAD51AP2Q09MP3 1159 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 TBC1D8BQ0IIM8 1120 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 TMEM62Q0P6H9 643 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 CUL4BQ13620 913 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 EMC2Q15006 297 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 POSTNQ15063 836 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 CAMK4Q16566 473 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 KANK3Q6NY19 840 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 MTHFD1LQ6UB35 978 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 RSPH3Q86UC2 560 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 METTL13Q8N6R0 699 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 DDX12PQ92771 950 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 LRCH3Q96II8 777 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 C7orf25Q9BPX7 421 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 TRIM9Q9C026 710 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 BLZF1Q9H2G9 400 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 POLD4Q9HCU8 107 aa13.23□□□□□ -0.29
PVT1-215ENST00000522963 LOXHD1Q8IVV2 1947 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 IGKV6-21A0A0C4DH24 114 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 MBLAC1A4D2B0 266 aaPredicted RBP13.22□□□□□ -0.29
PVT1-215ENST00000522963 GTPBP6O43824 516 aaPredicted RBP13.22□□□□□ -0.29
PVT1-215ENST00000522963 NBNO60934 754 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 ACTN1P12814 892 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 GUCY2CP25092 1073 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 FXR1P51114 621 aaKnown RBP eCLIP13.22□□□□□ -0.29
PVT1-215ENST00000522963 POLGP54098 1239 aaPredicted RBP13.22□□□□□ -0.29
PVT1-215ENST00000522963 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
PVT1-215ENST00000522963 RBL2Q08999 1139 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 DPYDQ12882 1025 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 MAPK7Q13164 816 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 PNOCQ13519 176 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 GIT2Q14161 759 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 SKOR2Q2VWA4 1001 aaPredicted RBP13.22□□□□□ -0.29
PVT1-215ENST00000522963 TAF2Q6P1X5 1199 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 CNNM4Q6P4Q7 775 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 MAEAQ7L5Y9 396 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 DYMQ7RTS9 669 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 SLC7A3Q8WY07 619 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 ERCC4Q92889 916 aaPredicted RBP13.22□□□□□ -0.29
PVT1-215ENST00000522963 DNAJC19Q96DA6 116 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 CCDC34Q96HJ3 373 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 PPP1R16BQ96T49 567 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 LRRC27Q9C0I9 530 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 NUP62CLQ9H1M0 184 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 MTIF3Q9H2K0 278 aaKnown RBP13.22□□□□□ -0.29
PVT1-215ENST00000522963 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 GPRC5CQ9NQ84 441 aa13.22□□□□□ -0.29
PVT1-215ENST00000522963 KCND2Q9NZV8 630 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms