RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ICAM4Q14773 271 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 SEC23AQ15436 765 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 ZNF174Q15697 407 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 CCDC144BQ3MJ40 725 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 GRAMD4Q6IC98 578 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 GGNQ86UU5 652 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 RTKN2Q8IZC4 609 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 CHST14Q8NCH0 376 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 NEIL1Q96FI4 390 aaPredicted RBP4.58□□□□□ -1.68
VPS13B-209ENST00000521559 LRRC37BQ96QE4 947 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 AMNQ9BXJ7 453 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 KLC2Q9H0B6 622 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 MEGF9Q9H1U4 602 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 TMEM260Q9NX78 707 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 TSC22D4Q9Y3Q8 395 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 NR2E1Q9Y466 385 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 PPRC1Q5VV67 1664 aaKnown RBP4.57□□□□□ -1.68
VPS13B-209ENST00000521559 PREX2Q70Z35 1606 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 ABCC1P33527 1531 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 ZNF518AQ6AHZ1 1483 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 MAGI2Q86UL8 1455 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 MLH3Q9UHC1 1453 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 RTEL1-TNFRSF6BF6WH68 1400 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 H7C1D1 291 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 ARHGAP6O43182 974 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 MPIG6BO95866 241 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 CYP17A1P05093 508 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 CR2P20023 1033 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 RRADP55042 308 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 SESN2P58004 480 aaPredicted RBP4.57□□□□□ -1.68
VPS13B-209ENST00000521559 CD83Q01151 205 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 SQSTM1Q13501 440 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 MOGSQ13724 837 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 NFYCQ13952 458 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 TCEA2Q15560 299 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 KANK2Q63ZY3 851 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 TMEM200BQ69YZ2 307 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 ABHD17CQ6PCB6 329 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 USP30Q70CQ3 517 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 TAX1BP1Q86VP1 789 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 NME9Q86XW9 330 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 HOMER1Q86YM7 354 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 FOXB1Q99853 325 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 PTPN18Q99952 460 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 PCIF1Q9H4Z3 704 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 CD248Q9HCU0 757 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 RRP7BPQ9NSQ0 103 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 INTS7Q9NVH2 962 aaKnown RBP4.57□□□□□ -1.68
VPS13B-209ENST00000521559 MAGEC2Q9UBF1 373 aaPredicted RBP4.57□□□□□ -1.68
VPS13B-209ENST00000521559 PUF60Q9UHX1 559 aaKnown RBP4.57□□□□□ -1.68
VPS13B-209ENST00000521559 ZFR2Q9UPR6 939 aaKnown RBP4.57□□□□□ -1.68
VPS13B-209ENST00000521559 JAG2Q9Y219 1238 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 SAMD9LQ8IVG5 1584 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 CFAP74Q9C0B2 1584 aa4.57□□□□□ -1.68
VPS13B-209ENST00000521559 CCDC141Q6ZP82 1450 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 DAPK1P53355 1430 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 YEATS2Q9ULM3 1422 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 ANKRD30AQ9BXX3 1397 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 MUSKO15146 869 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 MAFGO15525 162 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 KRT37O76014 449 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 ASMTLO95671 621 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 ZBTB48P10074 688 aaPredicted RBP4.56□□□□□ -1.68
VPS13B-209ENST00000521559 RPS19P39019 145 aaKnown RBP4.56□□□□□ -1.68
VPS13B-209ENST00000521559 MECP2P51608 486 aaKnown RBP4.56□□□□□ -1.68
VPS13B-209ENST00000521559 KIF11P52732 1056 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 ALDH6A1Q02252 535 aaKnown RBP4.56□□□□□ -1.68
VPS13B-209ENST00000521559 ROM1Q03395 351 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 CATSPEREQ5SY80 951 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 AGBL4Q5VU57 503 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 TRIM68Q6AZZ1 485 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 TCTN3Q6NUS6 607 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 LRSAM1Q6UWE0 723 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 Q8TCH9 128 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 ERCC4Q92889 916 aaPredicted RBP4.56□□□□□ -1.68
VPS13B-209ENST00000521559 LPPQ93052 612 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 CLUHP3Q96NS8 147 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 OR10A2Q9H208 303 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 C12orf65Q9H3J6 166 aaKnown RBP4.56□□□□□ -1.68
VPS13B-209ENST00000521559 CDC42EP3Q9UKI2 254 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 OAZ3Q9UMX2 235 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 PTPN22Q9Y2R2 807 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 VWA7Q9Y334 891 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 TESMINQ9Y4I5 508 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 TNPO3Q9Y5L0 923 aaKnown RBP4.56□□□□□ -1.68
VPS13B-209ENST00000521559 KDM6BO15054 1643 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 SYCP2Q9BX26 1530 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 ATP10AO60312 1499 aa4.56□□□□□ -1.68
VPS13B-209ENST00000521559 PTPRKQ15262 1439 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 C9orf84Q5VXU9 1444 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 MYO5CQ9NQX4 1742 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 CDC42BPBQ9Y5S2 1711 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 ROCK1Q13464 1354 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 DHX29Q7Z478 1369 aaKnown RBP4.55□□□□□ -1.68
VPS13B-209ENST00000521559 ARID4BQ4LE39 1312 aaPredicted RBP4.55□□□□□ -1.68
VPS13B-209ENST00000521559 PTPN23Q9H3S7 1636 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 PTPDC1A2A3K4 754 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 DNAJC8O75937 253 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms