RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 CA3P07451 260 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 STAG3L1P0CL83 205 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 ATP4AP20648 1035 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 QARSP47897 775 aaKnown RBP11.45□□□□□ -0.58
TRIM35-204ENST00000521283 TRAPPC10P48553 1259 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 RABGGTBP53611 331 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 CRYBB1P53674 252 aaPredicted RBP11.45□□□□□ -0.58
TRIM35-204ENST00000521283 HTRA4P83105 476 aaPredicted RBP11.45□□□□□ -0.58
TRIM35-204ENST00000521283 LPIN1Q14693 890 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 KRT40Q6A162 431 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 OTUD6AQ7L8S5 288 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 DIS3L2Q8IYB7 885 aaKnown RBP11.45□□□□□ -0.58
TRIM35-204ENST00000521283 NEK9Q8TD19 979 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 KIF2CQ99661 725 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 FAM49AQ9H0Q0 323 aaPredicted RBP11.45□□□□□ -0.58
TRIM35-204ENST00000521283 DAXXQ9UER7 740 aaPredicted RBP11.45□□□□□ -0.58
TRIM35-204ENST00000521283 PCDHA12Q9UN75 941 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 YBX2Q9Y2T7 364 aaKnown RBP11.45□□□□□ -0.58
TRIM35-204ENST00000521283 COL4A6Q14031 1691 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 LOXHD1Q8IVV2 1947 aa11.45□□□□□ -0.58
TRIM35-204ENST00000521283 TTC3P53804 2025 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 ZBTB42B2RXF5 422 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 CHMP2AO43633 222 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 GAS2O43903 313 aaKnown RBP11.44□□□□□ -0.58
TRIM35-204ENST00000521283 LARGE1O95461 756 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 C22orf31O95567 290 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 GHRP10912 638 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 GGCXP38435 758 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 PRKCEQ02156 737 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 TBC1D8BQ0IIM8 1120 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 PAK2Q13177 524 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 GNL2Q13823 731 aaKnown RBP11.44□□□□□ -0.58
TRIM35-204ENST00000521283 EPHA7Q15375 998 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 CCDC83Q8IWF9 413 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 KIAA0319LQ8IZA0 1049 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 MYOCDQ8IZQ8 938 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 SLC17A8Q8NDX2 589 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 FBXO18Q8NFZ0 1043 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 MAFAQ8NHW3 353 aaPredicted RBP11.44□□□□□ -0.58
TRIM35-204ENST00000521283 MYLIPQ8WY64 445 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 RSPH1Q8WYR4 309 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 TNFRSF25Q93038 417 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 TGS1Q96RS0 853 aaKnown RBP11.44□□□□□ -0.58
TRIM35-204ENST00000521283 INO80BQ9C086 356 aaPredicted RBP11.44□□□□□ -0.58
TRIM35-204ENST00000521283 PTPRSQ13332 1948 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 CDH23Q9H251 3354 aa11.44□□□□□ -0.58
TRIM35-204ENST00000521283 BTBD18B2RXH4 712 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 RNF223E7ERA6 249 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 ENPP3O14638 875 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 SLC37A4O43826 429 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 NEMFO60524 1076 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 JAK2O60674 1132 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 RPS6KA5O75582 802 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 DEFB103AP81534 67 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 TAP1Q03518 808 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 NR5A1Q13285 461 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 TARBP2Q15633 366 aaKnown RBP11.43□□□□□ -0.58
TRIM35-204ENST00000521283 CALCRLQ16602 461 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 EFCAB12Q6NXP0 572 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 C4orf19Q8IY42 314 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 METTL13Q8N6R0 699 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 YME1L1Q96TA2 773 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 PRDM12Q9H4Q4 367 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 ZSWIM4Q9H7M6 989 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 C1orf112Q9NSG2 853 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 PADI3Q9ULW8 664 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 NOL7Q9UMY1 257 aaKnown RBP11.43□□□□□ -0.58
TRIM35-204ENST00000521283 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.43□□□□□ -0.58
TRIM35-204ENST00000521283 SIP14410 1827 aa11.43□□□□□ -0.58
TRIM35-204ENST00000521283 COL6A3P12111 3177 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 ASAP2O43150 1006 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 ZNF862O60290 1169 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 XRCC6P12956 609 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRIM35-204ENST00000521283 RFC5P40937 340 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 ERVK-21P61565 698 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRIM35-204ENST00000521283 NPAS4Q8IUM7 802 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 TRAPPC12Q8WVT3 735 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 SLC7A3Q8WY07 619 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 HAS1Q92839 578 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 TBC1D32Q96NH3 1257 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 VAV3Q9UKW4 847 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 AKT3Q9Y243 479 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 RALGAPA2Q2PPJ7 1873 aa11.42□□□□□ -0.58
TRIM35-204ENST00000521283 IGKV6-21A0A0C4DH24 114 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.41□□□□□ -0.58
TRIM35-204ENST00000521283 CARNS1A5YM72 827 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 DDX11L8A8MPP1 907 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 LAD1O00515 517 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 GFRA3O60609 400 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 MAFO75444 373 aaPredicted RBP11.41□□□□□ -0.58
TRIM35-204ENST00000521283 LYPLA2O95372 231 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 RB1P06400 928 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 MYOGP15173 224 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 ZSCAN20P17040 1043 aaPredicted RBP11.41□□□□□ -0.58
TRIM35-204ENST00000521283 MUTP22033 750 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 EIF4BP23588 611 aaKnown RBP11.41□□□□□ -0.58
TRIM35-204ENST00000521283 CD52P31358 61 aa11.41□□□□□ -0.58
TRIM35-204ENST00000521283 PCBP1Q15365 356 aaKnown RBP eCLIP11.41□□□□□ -0.58
TRIM35-204ENST00000521283 NAALADL2Q58DX5 795 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms