RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RASSF10A6NK89 507 aa5.59□□□□□ -1.51
SQLE-204ENST00000520493 MAFO75444 373 aaPredicted RBP5.59□□□□□ -1.51
SQLE-204ENST00000520493 GLRX3O76003 335 aaKnown RBP5.59□□□□□ -1.51
SQLE-204ENST00000520493 POU3F2P20265 443 aaPredicted RBP5.59□□□□□ -1.51
SQLE-204ENST00000520493 RPS19P39019 145 aaKnown RBP5.59□□□□□ -1.51
SQLE-204ENST00000520493 MRE11P49959 708 aa5.59□□□□□ -1.51
SQLE-204ENST00000520493 KIF11P52732 1056 aa5.59□□□□□ -1.51
SQLE-204ENST00000520493 ALDH6A1Q02252 535 aaKnown RBP5.59□□□□□ -1.51
SQLE-204ENST00000520493 ROM1Q03395 351 aa5.59□□□□□ -1.51
SQLE-204ENST00000520493 PRKD1Q15139 912 aaPredicted RBP5.59□□□□□ -1.51
SQLE-204ENST00000520493 CATSPEREQ5SY80 951 aa5.59□□□□□ -1.51
SQLE-204ENST00000520493 NME9Q86XW9 330 aa5.59□□□□□ -1.51
SQLE-204ENST00000520493 RPUSD2Q8IZ73 545 aaKnown RBP5.59□□□□□ -1.51
SQLE-204ENST00000520493 AHI1Q8N157 1196 aa5.59□□□□□ -1.51
SQLE-204ENST00000520493 FOXB1Q99853 325 aa5.59□□□□□ -1.51
SQLE-204ENST00000520493 KIAA1683Q9H0B3 1180 aa5.59□□□□□ -1.51
SQLE-204ENST00000520493 TNPO3Q9Y5L0 923 aaKnown RBP5.59□□□□□ -1.51
SQLE-204ENST00000520493 PTPDC1A2A3K4 754 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 FOXS1O43638 330 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 DNAJC8O75937 253 aaPredicted RBP5.58□□□□□ -1.52
SQLE-204ENST00000520493 RAD17O75943 681 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 CYP17A1P05093 508 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 ZBTB48P10074 688 aaPredicted RBP5.58□□□□□ -1.52
SQLE-204ENST00000520493 MYCLP1P12525 358 aaPredicted RBP5.58□□□□□ -1.52
SQLE-204ENST00000520493 COMTP21964 271 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 MECP2P51608 486 aaKnown RBP5.58□□□□□ -1.52
SQLE-204ENST00000520493 SESN2P58004 480 aaPredicted RBP5.58□□□□□ -1.52
SQLE-204ENST00000520493 PCOLCEQ15113 449 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 PIK3R6Q5UE93 754 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 TRIM68Q6AZZ1 485 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 POLNQ7Z5Q5 900 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 ZNF575Q86XF7 245 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 DHX37Q8IY37 1157 aaKnown RBP5.58□□□□□ -1.52
SQLE-204ENST00000520493 PPM1KQ8N3J5 372 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 FAM89AQ96GI7 184 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 NAF1Q96HR8 494 aaKnown RBP5.58□□□□□ -1.52
SQLE-204ENST00000520493 CLUHP3Q96NS8 147 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 OR14A2Q96R54 314 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 DPYSL5Q9BPU6 564 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 CHMP4AQ9BY43 222 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 DDX56Q9NY93 547 aaKnown RBP5.58□□□□□ -1.52
SQLE-204ENST00000520493 TESMINQ9Y4I5 508 aa5.58□□□□□ -1.52
SQLE-204ENST00000520493 UBA6A0AVT1 1052 aaPredicted RBP5.57□□□□□ -1.52
SQLE-204ENST00000520493 GSG1L2A8MUP6 293 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 PDE8AO60658 829 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 JMJD7P0C870 316 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 CPEP16870 476 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 CFAP100Q494V2 611 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 LARP4Q71RC2 724 aaKnown RBP eCLIP5.57□□□□□ -1.52
SQLE-204ENST00000520493 RNF180Q86T96 592 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 FUKQ8N0W3 1084 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 LPPQ93052 612 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 ADOQ96SZ5 270 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 SAE1Q9UBE0 346 aaPredicted RBP5.57□□□□□ -1.52
SQLE-204ENST00000520493 ATP8A1Q9Y2Q0 1164 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 VWA7Q9Y334 891 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 TNFRSF18Q9Y5U5 241 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 SLC30A1Q9Y6M5 507 aa5.57□□□□□ -1.52
SQLE-204ENST00000520493 ALG1L2C9J202 215 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 MAFGO15525 162 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 H2AFYO75367 372 aaKnown RBP5.56□□□□□ -1.52
SQLE-204ENST00000520493 STAT5BP51692 787 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 SLC6A3Q01959 620 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 HHEXQ03014 270 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 ZNF460Q14592 562 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 NOLC1Q14978 699 aaKnown RBP eCLIP5.56□□□□□ -1.52
SQLE-204ENST00000520493 CDSNQ15517 529 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 SMN1Q16637 294 aaKnown RBP5.56□□□□□ -1.52
SQLE-204ENST00000520493 TTC38Q5R3I4 469 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 SLFN12LQ6IEE8 588 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 RTN4RL1Q86UN2 441 aaPredicted RBP5.56□□□□□ -1.52
SQLE-204ENST00000520493 LRRTM3Q86VH5 581 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 KIAA1958Q8N8K9 716 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 OR14K1Q8NGZ2 314 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 WWC2-AS2Q96NR7 200 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 PLA2G12BQ9BX93 195 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 NELFAQ9H3P2 528 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 MCM8Q9UJA3 840 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 ZKSCAN5Q9Y2L8 839 aa5.56□□□□□ -1.52
SQLE-204ENST00000520493 PRLP01236 227 aa5.55□□□□□ -1.52
SQLE-204ENST00000520493 PDGFRBP09619 1106 aa5.55□□□□□ -1.52
SQLE-204ENST00000520493 CNGA1P29973 690 aa5.55□□□□□ -1.52
SQLE-204ENST00000520493 DGKDQ16760 1214 aa5.55□□□□□ -1.52
SQLE-204ENST00000520493 CT47A1Q5JQC4 288 aaPredicted RBP5.55□□□□□ -1.52
SQLE-204ENST00000520493 SPDYAQ5MJ70 313 aa5.55□□□□□ -1.52
SQLE-204ENST00000520493 CDCA2Q69YH5 1023 aaPredicted RBP5.55□□□□□ -1.52
SQLE-204ENST00000520493 KLHDC10Q6PID8 442 aa5.55□□□□□ -1.52
SQLE-204ENST00000520493 RPGRQ92834 1020 aaKnown RBP5.55□□□□□ -1.52
SQLE-204ENST00000520493 EDAQ92838 391 aa5.55□□□□□ -1.52
SQLE-204ENST00000520493 GFM2Q969S9 779 aaKnown RBP5.55□□□□□ -1.52
SQLE-204ENST00000520493 FOXRED1Q96CU9 486 aaPredicted RBP5.55□□□□□ -1.52
SQLE-204ENST00000520493 MAML3Q96JK9 1138 aa5.55□□□□□ -1.52
SQLE-204ENST00000520493 TUBGCP5Q96RT8 1024 aa5.55□□□□□ -1.52
SQLE-204ENST00000520493 HOMER2Q9NSB8 354 aa5.55□□□□□ -1.52
SQLE-204ENST00000520493 B4GALT6Q9UBX8 382 aa5.55□□□□□ -1.52
SQLE-204ENST00000520493 CBX4O00257 560 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 TRAF5O00463 557 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 SLC26A4O43511 780 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 MARCH6O60337 910 aa5.54□□□□□ -1.52
SQLE-204ENST00000520493 GAS7O60861 476 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms