RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 LARGE1O95461 756 aa18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 GTF2F1P35269 517 aaKnown RBP eCLIP18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 HYAL1Q12794 435 aa18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 PUS10Q3MIT2 529 aaKnown RBP18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 NAALADL2Q58DX5 795 aa18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 CCDC43Q96MW1 224 aaKnown RBP18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 HCSTQ9UBK5 93 aa18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 EVPLQ92817 2033 aa18.11■□□□□ 0.49
IGHV3-42-201ENST00000520410 TTC3P53804 2025 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 KIAA1671Q9BY89 1806 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 A0A087WZ62 844 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 CTDNEP1O95476 244 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 DARSP14868 501 aaKnown RBP18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 COL9A1P20849 921 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 SFPQP23246 707 aaKnown RBP eCLIP18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 POLGP54098 1239 aaPredicted RBP18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 NR5A1Q13285 461 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 DRP2Q13474 957 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 ME3Q16798 604 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 ZNF710Q8N1W2 664 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 LINC01465Q8N7H1 131 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 SPPL3Q8TCT6 385 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 GTF3C6Q969F1 213 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 CEP170P1Q96L14 293 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 FAM20AQ96MK3 541 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 FDXACB1Q9BRP7 624 aaPredicted RBP18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 C1QTNF1Q9BXJ1 281 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 ADAMTS10Q9H324 1103 aa18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 TYW1Q9NV66 732 aaKnown RBP18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 SUCLA2Q9P2R7 463 aaPredicted RBP18.1■□□□□ 0.49
IGHV3-42-201ENST00000520410 FAM205CA6NFA0 338 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 EML1O00423 815 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 LINC01565O15544 149 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 LAG3P18627 525 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 DNAJB1P25685 340 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 IRS1P35568 1242 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 QARSP47897 775 aaKnown RBP18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 NRIP1P48552 1158 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 LONRF3Q496Y0 759 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 TWF2Q6IBS0 349 aaKnown RBP18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 GJD3Q8N144 294 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 COLGALT1Q8NBJ5 622 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 NEK9Q8TD19 979 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 SLC7A3Q8WY07 619 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 MBOAT7Q96N66 472 aa18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 JPH2Q9BR39 696 aaPredicted RBP18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 NIFKQ9BYG3 293 aaKnown RBP18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 ELAC1Q9H777 363 aaKnown RBP18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 PIN4Q9Y237 131 aaKnown RBP18.09■□□□□ 0.49
IGHV3-42-201ENST00000520410 GRXCR2A6NFK2 248 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 JAK2O60674 1132 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 FGF18O76093 207 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 ATP2B1P20020 1258 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 CYP4A11Q02928 519 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 PPP2R5CQ13362 524 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 DSC3Q14574 896 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 PPP4R3AQ6IN85 833 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 FAM43BQ6ZT52 329 aaPredicted RBP18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 CATSPER4Q7RTX7 472 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 ADGRD2Q7Z7M1 963 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 ECHDC2Q86YB7 292 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 SLFN12Q8IYM2 578 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 CRIPAKQ8N1N5 446 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 LRRC43Q8N309 656 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 HELQQ8TDG4 1101 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 LXNQ9BS40 222 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 INO80BQ9C086 356 aaPredicted RBP18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 TMEM117Q9H0C3 514 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 EPHX3Q9H6B9 360 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 ENTPD7Q9NQZ7 604 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 CYP26B1Q9NR63 512 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 TLR9Q9NR96 1032 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 DACT1Q9NYF0 836 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 PCDHGC5Q9Y5F6 944 aa18.08■□□□□ 0.48
IGHV3-42-201ENST00000520410 P4HBP07237 508 aaKnown RBP18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 NPEPPSP55786 919 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 CDC42EP1Q00587 391 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 GUCY1B3Q02153 619 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 CTTNQ14247 550 aaKnown RBP18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 TARBP2Q15633 366 aaKnown RBP18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 CSPP1Q1MSJ5 1256 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 EARS2Q5JPH6 523 aaKnown RBP18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 PLPP4Q5VZY2 271 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 ANO5Q75V66 913 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 KSR1Q8IVT5 923 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 FAM178BQ8IXR5 827 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 DYDC2Q96IM9 177 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 ZNF558Q96NG5 402 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 TLE6Q9H808 572 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 KCNMB3Q9NPA1 279 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 VAV3Q9UKW4 847 aa18.07■□□□□ 0.48
IGHV3-42-201ENST00000520410 FAM86C2PA6NEL3 165 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 TBX3O15119 743 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 TBX10O75333 385 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 MAFO75444 373 aaPredicted RBP18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 PBX3P40426 434 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 DLX2Q07687 328 aaPredicted RBP18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 GNL2Q13823 731 aaKnown RBP18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 EPHA7Q15375 998 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms