RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 RAVER2Q9HCJ3 691 aaKnown RBP8.9□□□□□ -0.98
CTHRC1-203ENST00000520337 CEP131Q9UPN4 1083 aa8.9□□□□□ -0.98
CTHRC1-203ENST00000520337 HPSEQ9Y251 543 aa8.9□□□□□ -0.98
CTHRC1-203ENST00000520337 USTQ9Y2C2 406 aa8.9□□□□□ -0.98
CTHRC1-203ENST00000520337 MRPL11Q9Y3B7 192 aaKnown RBP8.9□□□□□ -0.98
CTHRC1-203ENST00000520337 MYPNQ86TC9 1320 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 A0A1B0GVL5 298 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 ATP2A1O14983 1001 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 ZBED4O75132 1171 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 CELF2O95319 508 aaKnown RBP8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 FOSP01100 380 aaPredicted RBP8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 PDGFAP04085 211 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 HOXA13P31271 388 aaPredicted RBP8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 NDUFA8P51970 172 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 GHRHRQ02643 423 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 AP3B2Q13367 1082 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 MRPS27Q92552 414 aaKnown RBP8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 PMEPA1Q969W9 287 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 FERMT2Q96AC1 680 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 ANO3Q9BYT9 981 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 GBA2Q9HCG7 927 aaPredicted RBP8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 HOXC10Q9NYD6 342 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 DACT1Q9NYF0 836 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 ZNF214Q9UL59 606 aaPredicted RBP8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 CCPG1Q9ULG6 757 aa8.89□□□□□ -0.99
CTHRC1-203ENST00000520337 CYP3A7-CYP3A51PA0A087WV96 503 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 GCOM1H8Y6P7 765 aaPredicted RBP8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 NFIBO00712 420 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 CCNT1O60563 726 aaKnown RBP8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 POLR2MP0CAP2 368 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 PFKFB1P16118 471 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 NPR3P17342 541 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 CYP3A7P24462 503 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 MPSTP25325 297 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 SREBF1P36956 1147 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 EIF1AXP47813 144 aaKnown RBP8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 HSD17B4P51659 736 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 USP11P51784 963 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 OAZ1P54368 228 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 ZNF445P59923 1031 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 FAM160A1Q05DH4 1040 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 ORC2Q13416 577 aaPredicted RBP8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 TMEM132BQ14DG7 1078 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 LETM2Q2VYF4 491 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 MUM1L1Q5H9M0 696 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 SPECC1Q5M775 1068 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 CCDC183Q5T5S1 534 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 ARL6IP4Q66PJ3 421 aaKnown RBP8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 MCTP2Q6DN12 878 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 PPP4R3AQ6IN85 833 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 FAM117BQ6P1L5 589 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 GADL1Q6ZQY3 521 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 Q6ZS46 218 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 USP49Q70CQ1 688 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 CPXCR1Q8N123 301 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 MBOAT7Q96N66 472 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 MTMR9Q96QG7 549 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 CSRNP2Q9H175 543 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 PNMA2Q9UL42 364 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 RIPK3Q9Y572 518 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 DOCK3Q8IZD9 2030 aa8.88□□□□□ -0.99
CTHRC1-203ENST00000520337 SCO2A0A1W2PP80 73 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 LAD1O00515 517 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 SLC37A4O43826 429 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 ZNF202O95125 648 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 TDP2O95551 362 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 CFBP00751 764 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 CYP3A4P08684 503 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 ALAS1P13196 640 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 CES1P23141 567 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 CIITAP33076 1130 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 PRPHP41219 470 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 ARHGAP4P98171 946 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 SNAPC2Q13487 334 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 LBX2Q6XYB7 198 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 CCDC73Q6ZRK6 1079 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 PRR23CQ6ZRP0 262 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 RBM43Q6ZSC3 357 aaKnown RBP8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 FASTKD5Q7L8L6 764 aaKnown RBP8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 GAS2L3Q86XJ1 694 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 C2orf69Q8N8R5 385 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 KLHL23Q8NBE8 558 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 SYAP1Q96A49 352 aaPredicted RBP8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 LACRTQ9GZZ8 138 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 ADAM19Q9H013 955 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 ASCC2Q9H1I8 757 aaPredicted RBP8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 CLSTN2Q9H4D0 955 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 DDX19AQ9NUU7 478 aaKnown RBP8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 COL20A1Q9P218 1284 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 SALL4Q9UJQ4 1053 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 KCNH3Q9ULD8 1083 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 AGTPBP1Q9UPW5 1226 aa8.87□□□□□ -0.99
CTHRC1-203ENST00000520337 MCM3APO60318 1980 aa8.86□□□□□ -0.99
CTHRC1-203ENST00000520337 RPTORQ8N122 1335 aa8.86□□□□□ -0.99
CTHRC1-203ENST00000520337 PASKQ96RG2 1323 aa8.86□□□□□ -0.99
CTHRC1-203ENST00000520337 DOCK5Q9H7D0 1870 aa8.86□□□□□ -0.99
CTHRC1-203ENST00000520337 SYCE3A1L190 88 aa8.86□□□□□ -0.99
CTHRC1-203ENST00000520337 VWA3AA6NCI4 1184 aa8.86□□□□□ -0.99
CTHRC1-203ENST00000520337 LINC01387J3KSC0 135 aa8.86□□□□□ -0.99
CTHRC1-203ENST00000520337 NEMFO60524 1076 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms