RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PTPN22Q9Y2R2 807 aa6.81□□□□□ -1.32
HMGB1P46-201ENST00000520062 MYPNQ86TC9 1320 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 OR14I1A6ND48 311 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 CTNND1O60716 968 aaKnown RBP6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 DTNBO60941 627 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 ITGB7P26010 798 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 RGS3P49796 1198 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 LGALS4P56470 323 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 NKX3-2P78367 333 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 KIF23Q02241 960 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 TRIM25Q14258 630 aaKnown RBP6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 UNQ6494/PRO21346Q6UXR6 183 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 SRGAP1Q7Z6B7 1085 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 ZC3H18Q86VM9 953 aaKnown RBP6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 PROSER1Q86XN7 944 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 IRF2BP1Q8IU81 584 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 DIS3LQ8TF46 1054 aaKnown RBP6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 TSPEARQ8WU66 669 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 CPA5Q8WXQ8 436 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 COA7Q96BR5 231 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 DDX11Q96FC9 970 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 MAP3K14Q99558 947 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 BTBD2Q9BX70 525 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 AMNQ9BXJ7 453 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 GTPBP4Q9BZE4 634 aaKnown RBP6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 DPP7Q9UHL4 492 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 PRSS50Q9UI38 385 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 CDY2AQ9Y6F7 541 aa6.8□□□□□ -1.32
HMGB1P46-201ENST00000520062 NBPF7P0C2Y1 421 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 APEX1P27695 318 aaKnown RBP6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 WASP42768 502 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 ECE1P42892 770 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 PICALMQ13492 652 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 CR1LQ2VPA4 569 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 LONRF3Q496Y0 759 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 VASNQ6EMK4 673 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 USP45Q70EL2 814 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 C11orf96Q7Z7L8 435 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 PRR18Q8N4B5 295 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 ALG3Q92685 438 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 FATE1Q969F0 183 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 KIRREL1Q96J84 757 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 SLC2A13Q96QE2 648 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 ACE2Q9BYF1 805 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 MTG2Q9H4K7 406 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 PRDM12Q9H4Q4 367 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 SLC39A2Q9NP94 309 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 DDX20Q9UHI6 824 aaKnown RBP6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 USP25Q9UHP3 1055 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 HCFC2Q9Y5Z7 792 aa6.79□□□□□ -1.32
HMGB1P46-201ENST00000520062 A0A0A6YYJ9 748 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 OPHN1O60890 802 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 HRGP04196 525 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 PDCP20941 246 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 SDHBP21912 280 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 THBS2P35442 1172 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 PFKPQ01813 784 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 NFATC3Q12968 1075 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 MALLQ13021 153 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 GALEQ14376 348 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 ZNF267Q14586 743 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 SAFBQ15424 915 aaKnown RBP eCLIP6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 UAP1L1Q3KQV9 507 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 CATIPQ7Z7H3 387 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 CDYL2Q8N8U2 506 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 C1GALT1C1Q96EU7 318 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 MVB12AQ96EY5 273 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 PAWRQ96IZ0 340 aaKnown RBP6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 MPHOSPH6Q99547 160 aaKnown RBP6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 OR10A5Q9H207 317 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 FAM204AQ9H8W3 233 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 PCDH18Q9HCL0 1135 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 DLL4Q9NR61 685 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 PCMTD2Q9NV79 361 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 KCMF1Q9P0J7 381 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 SERPINB13Q9UIV8 391 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 PCDHB6Q9Y5E3 794 aa6.78□□□□□ -1.32
HMGB1P46-201ENST00000520062 H3BML4 177 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 NRP2O60462 931 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 PCDH8O95206 1070 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 STAT5AP42229 794 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 PPARAQ07869 468 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 NOLC1Q14978 699 aaKnown RBP eCLIP6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 STILQ15468 1287 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 ADRM1Q16186 407 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 LIPIQ6XZB0 460 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 BMP8AQ7Z5Y6 402 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 DTX3Q8N9I9 347 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 TMEM209Q96SK2 561 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 ACO2Q99798 780 aaKnown RBP6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 FTSJ1Q9UET6 329 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 DNM3Q9UQ16 869 aa6.77□□□□□ -1.33
HMGB1P46-201ENST00000520062 CUTAO60888 179 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 ADAMTS4O75173 837 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 ZBED1O96006 694 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 CELA3BP08861 270 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 IFIT2P09913 472 aaKnown RBP6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 FBLN1P23142 703 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 PDE6BP35913 854 aa6.76□□□□□ -1.33
HMGB1P46-201ENST00000520062 USP14P54578 494 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms