RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 UBE3AQ05086 875 aa28.45■■■□□ 2.14
VEGFA-220ENST00000519767 PPP2R5CQ13362 524 aa28.45■■■□□ 2.14
VEGFA-220ENST00000519767 MTERF2Q49AM1 385 aa28.45■■■□□ 2.14
VEGFA-220ENST00000519767 SPOUT1Q5T280 376 aaKnown RBP28.45■■■□□ 2.14
VEGFA-220ENST00000519767 NLRP7Q8WX94 980 aa28.45■■■□□ 2.14
VEGFA-220ENST00000519767 JPH2Q9BR39 696 aaPredicted RBP28.45■■■□□ 2.14
VEGFA-220ENST00000519767 KCNMB3Q9NPA1 279 aa28.45■■■□□ 2.14
VEGFA-220ENST00000519767 IGKV6-21A0A0C4DH24 114 aa28.44■■■□□ 2.14
VEGFA-220ENST00000519767 SLC37A4O43826 429 aa28.44■■■□□ 2.14
VEGFA-220ENST00000519767 CTDNEP1O95476 244 aa28.44■■■□□ 2.14
VEGFA-220ENST00000519767 EXOC8Q8IYI6 725 aa28.44■■■□□ 2.14
VEGFA-220ENST00000519767 CEP89Q96ST8 783 aa28.44■■■□□ 2.14
VEGFA-220ENST00000519767 GCOM2Q9BZD3 368 aaPredicted RBP28.44■■■□□ 2.14
VEGFA-220ENST00000519767 TYW1Q9NV66 732 aaKnown RBP28.44■■■□□ 2.14
VEGFA-220ENST00000519767 MARCH6O60337 910 aa28.43■■■□□ 2.14
VEGFA-220ENST00000519767 CCNT1O60563 726 aaKnown RBP28.43■■■□□ 2.14
VEGFA-220ENST00000519767 MAFO75444 373 aaPredicted RBP28.43■■■□□ 2.14
VEGFA-220ENST00000519767 LTBRP36941 435 aa28.43■■■□□ 2.14
VEGFA-220ENST00000519767 QARSP47897 775 aaKnown RBP28.43■■■□□ 2.14
VEGFA-220ENST00000519767 PIK3AP1Q6ZUJ8 805 aa28.43■■■□□ 2.14
VEGFA-220ENST00000519767 GJD3Q8N144 294 aa28.43■■■□□ 2.14
VEGFA-220ENST00000519767 POF1BQ8WVV4 589 aa28.43■■■□□ 2.14
VEGFA-220ENST00000519767 INO80BQ9C086 356 aaPredicted RBP28.43■■■□□ 2.14
VEGFA-220ENST00000519767 TMEM117Q9H0C3 514 aa28.43■■■□□ 2.14
VEGFA-220ENST00000519767 BRMS1Q9HCU9 246 aa28.43■■■□□ 2.14
VEGFA-220ENST00000519767 CHST12Q9NRB3 414 aa28.43■■■□□ 2.14
VEGFA-220ENST00000519767 IL9P15248 144 aa28.42■■■□□ 2.14
VEGFA-220ENST00000519767 DNAJB1P25685 340 aa28.42■■■□□ 2.14
VEGFA-220ENST00000519767 ADAM15Q13444 863 aa28.42■■■□□ 2.14
VEGFA-220ENST00000519767 OXER1Q8TDS5 423 aa28.42■■■□□ 2.14
VEGFA-220ENST00000519767 IGFLR1Q9H665 355 aa28.42■■■□□ 2.14
VEGFA-220ENST00000519767 GJB4Q9NTQ9 266 aa28.42■■■□□ 2.14
VEGFA-220ENST00000519767 DACT1Q9NYF0 836 aa28.42■■■□□ 2.14
VEGFA-220ENST00000519767 PRKAG3Q9UGI9 489 aa28.42■■■□□ 2.14
VEGFA-220ENST00000519767 VAV3Q9UKW4 847 aa28.42■■■□□ 2.14
VEGFA-220ENST00000519767 PPME1Q9Y570 386 aa28.42■■■□□ 2.14
VEGFA-220ENST00000519767 A0A0U1RQF3 1178 aa28.41■■■□□ 2.14
VEGFA-220ENST00000519767 BAG4O95429 457 aaKnown RBP28.41■■■□□ 2.14
VEGFA-220ENST00000519767 EOMESO95936 686 aa28.41■■■□□ 2.14
VEGFA-220ENST00000519767 P4HBP07237 508 aaKnown RBP28.41■■■□□ 2.14
VEGFA-220ENST00000519767 ANO5Q75V66 913 aa28.41■■■□□ 2.14
VEGFA-220ENST00000519767 ECHDC2Q86YB7 292 aa28.41■■■□□ 2.14
VEGFA-220ENST00000519767 GTF3C6Q969F1 213 aa28.41■■■□□ 2.14
VEGFA-220ENST00000519767 SUCLA2Q9P2R7 463 aaPredicted RBP28.41■■■□□ 2.14
VEGFA-220ENST00000519767 EML1O00423 815 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 FGFR1P11362 822 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 FDPSP14324 419 aaKnown RBP28.4■■■□□ 2.14
VEGFA-220ENST00000519767 LAG3P18627 525 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 COL9A1P20849 921 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 KRT2P35908 639 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 NEK4P51957 841 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 ME3Q16798 604 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 PDE12Q6L8Q7 609 aaKnown RBP28.4■■■□□ 2.14
VEGFA-220ENST00000519767 ZNF410Q86VK4 478 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 SLFN12Q8IYM2 578 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 ABI1Q8IZP0 508 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 NECAB1Q8N987 351 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 ZNF668Q96K58 619 aaPredicted RBP28.4■■■□□ 2.14
VEGFA-220ENST00000519767 EPHX3Q9H6B9 360 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 CD320Q9NPF0 282 aa28.4■■■□□ 2.14
VEGFA-220ENST00000519767 SSTR3P32745 418 aaPredicted RBP28.39■■■□□ 2.14
VEGFA-220ENST00000519767 DRP2Q13474 957 aa28.39■■■□□ 2.14
VEGFA-220ENST00000519767 EPHA7Q15375 998 aa28.39■■■□□ 2.14
VEGFA-220ENST00000519767 COLGALT1Q8NBJ5 622 aa28.39■■■□□ 2.14
VEGFA-220ENST00000519767 MICAL1Q8TDZ2 1067 aa28.39■■■□□ 2.14
VEGFA-220ENST00000519767 HAS1Q92839 578 aa28.39■■■□□ 2.14
VEGFA-220ENST00000519767 CASD1Q96PB1 797 aa28.39■■■□□ 2.14
VEGFA-220ENST00000519767 CWH43Q9H720 699 aa28.39■■■□□ 2.14
VEGFA-220ENST00000519767 CYP26B1Q9NR63 512 aa28.39■■■□□ 2.14
VEGFA-220ENST00000519767 TMEM150BA6NC51 233 aa28.38■■■□□ 2.13
VEGFA-220ENST00000519767 FGF18O76093 207 aa28.38■■■□□ 2.13
VEGFA-220ENST00000519767 THNSL1Q8IYQ7 743 aa28.38■■■□□ 2.13
VEGFA-220ENST00000519767 EFHBQ8N7U6 833 aa28.38■■■□□ 2.13
VEGFA-220ENST00000519767 SLC7A3Q8WY07 619 aa28.38■■■□□ 2.13
VEGFA-220ENST00000519767 RSPH1Q8WYR4 309 aa28.38■■■□□ 2.13
VEGFA-220ENST00000519767 SH2D3AQ9BRG2 576 aa28.38■■■□□ 2.13
VEGFA-220ENST00000519767 PUF60Q9UHX1 559 aaKnown RBP28.38■■■□□ 2.13
VEGFA-220ENST00000519767 LZTS1Q9Y250 596 aa28.38■■■□□ 2.13
VEGFA-220ENST00000519767 A0A087WZ62 844 aa28.37■■■□□ 2.13
VEGFA-220ENST00000519767 PI4K2BG5E9Z4 385 aa28.37■■■□□ 2.13
VEGFA-220ENST00000519767 SFPQP23246 707 aaKnown RBP eCLIP28.37■■■□□ 2.13
VEGFA-220ENST00000519767 IRS1P35568 1242 aa28.37■■■□□ 2.13
VEGFA-220ENST00000519767 OTUD6AQ7L8S5 288 aa28.37■■■□□ 2.13
VEGFA-220ENST00000519767 RHPN2Q8IUC4 686 aa28.37■■■□□ 2.13
VEGFA-220ENST00000519767 FDXACB1Q9BRP7 624 aaPredicted RBP28.37■■■□□ 2.13
VEGFA-220ENST00000519767 TRAIPQ9BWF2 469 aa28.37■■■□□ 2.13
VEGFA-220ENST00000519767 TLR9Q9NR96 1032 aa28.37■■■□□ 2.13
VEGFA-220ENST00000519767 WDR81Q562E7 1941 aa28.36■■■□□ 2.13
VEGFA-220ENST00000519767 FSD2A1L4K1 749 aa28.36■■■□□ 2.13
VEGFA-220ENST00000519767 CSPG5O95196 566 aa28.36■■■□□ 2.13
VEGFA-220ENST00000519767 SKIP12755 728 aa28.36■■■□□ 2.13
VEGFA-220ENST00000519767 GTF2F1P35269 517 aaKnown RBP eCLIP28.36■■■□□ 2.133e-11■■■■■ 42.3
VEGFA-220ENST00000519767 PLCB3Q01970 1234 aa28.36■■■□□ 2.13
VEGFA-220ENST00000519767 DLX2Q07687 328 aaPredicted RBP28.36■■■□□ 2.13
VEGFA-220ENST00000519767 C4orf19Q8IY42 314 aa28.36■■■□□ 2.13
VEGFA-220ENST00000519767 LRRC43Q8N309 656 aa28.36■■■□□ 2.13
VEGFA-220ENST00000519767 CEP170P1Q96L14 293 aa28.36■■■□□ 2.13
VEGFA-220ENST00000519767 TLE6Q9H808 572 aa28.36■■■□□ 2.13
VEGFA-220ENST00000519767 RNF19AQ9NV58 838 aa28.36■■■□□ 2.13
VEGFA-220ENST00000519767 CD207Q9UJ71 328 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms