RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 STK11IPQ8N1F8 1099 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 ZNF513Q8N8E2 541 aaPredicted RBP8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 GMCL1P1Q8NEA9 526 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 SPATA18Q8TC71 538 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 TBC1D5Q92609 795 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 ZBTB10Q96DT7 871 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 PCGF6Q9BYE7 350 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 CLMPQ9H6B4 373 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 GPCPD1Q9NPB8 672 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 RNF19AQ9NV58 838 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 DZANK1Q9NVP4 752 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 C2orf42Q9NWW7 574 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 COL20A1Q9P218 1284 aa8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 DBNLQ9UJU6 430 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-216ENST00000519489 FAM221BA6H8Z2 402 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 C4orf47A7E2U8 309 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 IGSF3O75054 1194 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 FDX1P10109 184 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 FGFR1P11362 822 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 PDE6AP16499 860 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 CLCN1P35523 988 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 STAT2P52630 851 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 SATB1Q01826 763 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 SP2Q02086 613 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 GAS6Q14393 721 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 TNNI3KQ59H18 835 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 SYDE2Q5VT97 1194 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 MYSM1Q5VVJ2 828 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 CTR9Q6PD62 1173 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 C12orf50Q8NA57 414 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 FGF14Q92915 247 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 CEP95Q96GE4 821 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 FAM217BQ9NTX9 383 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 FPGT-TNNI3KV9GXZ4 949 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 ACACAQ13085 2346 aa8.04□□□□□ -1.12
CTNNA1-216ENST00000519489 PTPRQQ9UMZ3 2332 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 SRGAP3O43295 1099 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 FOXD2O60548 495 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 PPFIA4O75335 1185 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 CXCL14O95715 111 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 MCCP23508 829 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 RPS9P46781 194 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 ADCY1Q08828 1119 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 LAMC2Q13753 1193 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 SMC1AQ14683 1233 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 ZBTB41Q5SVQ8 909 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 RNF43Q68DV7 783 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 TTBK2Q6IQ55 1244 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 KCNT2Q6UVM3 1135 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 PCSK4Q6UW60 755 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 PARM1Q6UWI2 310 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 TSHZ1Q6ZSZ6 1077 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 CABP7Q86V35 215 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 TMEM173Q86WV6 379 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 TRIM50Q86XT4 487 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 LMBR1Q8WVP7 490 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 GPKOWQ92917 476 aaPredicted RBP eCLIP8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 SHDQ96IW2 340 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 MEIS3Q99687 375 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 WDR6Q9NNW5 1121 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 MTMR4Q9NYA4 1195 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 ZBED9Q6R2W3 1325 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 NRCAMQ92823 1304 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 ZNF532Q9HCE3 1301 aa8.03□□□□□ -1.12
CTNNA1-216ENST00000519489 H3BRB1 525 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 K7ESF4 209 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 ATXN7O15265 892 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 ZBTB24O43167 697 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 HOXA2O43364 376 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 DXOO77932 396 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 STAG3L1P0CL83 205 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 MYBP10242 640 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 LAMP2P13473 410 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 CEACAM1P13688 526 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 NONOQ15233 471 aaKnown RBP eCLIP8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 CCDC158Q5M9N0 1113 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 RNF207Q6ZRF8 634 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 FAM160B2Q86V87 743 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 SLC39A11Q8N1S5 342 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 DEFB124Q8NES8 71 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 DNERQ8NFT8 737 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 MDM1Q8TC05 714 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 TAAR1Q96RJ0 339 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 UBL7Q96S82 380 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 USB1Q9BQ65 265 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 ZBP1Q9H171 429 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 RANBP17Q9H2T7 1088 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 TUT1Q9H6E5 874 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 SFXN1Q9H9B4 322 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 TOR4AQ9NXH8 423 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 PUF60Q9UHX1 559 aaKnown RBP8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 PADI3Q9ULW8 664 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 CDY2AQ9Y6F7 541 aa8.02□□□□□ -1.13
CTNNA1-216ENST00000519489 DOCK8Q8NF50 2099 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 PNMA6EA0A0J9YXQ4 647 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 NT5C1B-RDH14C9J2C7 533 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 PLA2G6O60733 806 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 EPN2O95208 641 aa8.01□□□□□ -1.13
CTNNA1-216ENST00000519489 LGALS2P05162 132 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms