RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, human

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD3-209	ENST00000519485	CBLC	Q9ULV8	474 aa		4.59	□□□□□ -1.67
CSMD3-209	ENST00000519485	NOP58	Q9Y2X3	529 aa	Known RBP	4.59	□□□□□ -1.67
CSMD3-209	ENST00000519485	TRAF6	Q9Y4K3	522 aa		4.59	□□□□□ -1.67
CSMD3-209	ENST00000519485	ASB1	Q9Y576	335 aa		4.59	□□□□□ -1.67
CSMD3-209	ENST00000519485	XDH	P47989	1333 aa		4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	TRBV23-1	A0A0A0MS06	115 aa		4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485		A0A1W2PRX2	142 aa		4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	PYGM	P11217	842 aa		4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	IL12RB1	P42701	662 aa		4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	STAT5B	P51692	787 aa		4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	RBL2	Q08999	1139 aa		4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	MAP3K12	Q12852	859 aa		4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	CNGB1	Q14028	1251 aa	Predicted RBP	4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	EP400NL	Q6ZTU2	488 aa		4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	MTDH	Q86UE4	582 aa	Known RBP	4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	ZNF764	Q96H86	408 aa	Predicted RBP	4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	DNAJC2	Q99543	621 aa	Known RBP	4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	UCKL1	Q9NWZ5	548 aa		4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	FAM184B	Q9ULE4	1060 aa		4.58	□□□□□ -1.68
CSMD3-209	ENST00000519485	ERICH3	Q5RHP9	1530 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	SOGA1	O94964	1423 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	PPM1G	O15355	546 aa	Predicted RBP	4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	DIAPH1	O60610	1272 aa	Known RBP	4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	PPFIA4	O75335	1185 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	SDHA	P31040	664 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	SUMO1	P63165	101 aa	Known RBP	4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	ADAM8	P78325	824 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	SEC23A	Q15436	765 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	FAM209A	Q5JX71	171 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	KLHDC10	Q6PID8	442 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	NOSTRIN	Q8IVI9	506 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	SREK1	Q8WXA9	508 aa	Known RBP	4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	ASB15	Q8WXK1	588 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	NRDE2	Q9H7Z3	1164 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	SNTG2	Q9NY99	539 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	TRPS1	Q9UHF7	1281 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	PACSIN3	Q9UKS6	424 aa		4.57	□□□□□ -1.68
CSMD3-209	ENST00000519485	MAP3K1	Q13233	1512 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	CECR2	Q9BXF3	1484 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	CCNB3	Q8WWL7	1395 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	FAM221B	A6H8Z2	402 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	MME	P08473	750 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	C6orf222	P0C671	652 aa	Predicted RBP	4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	FAM153B	P0C7A2	387 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	KRT15	P19012	456 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	APEX1	P27695	318 aa	Known RBP	4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	RABGGTB	P53611	331 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	SMAD3	P84022	425 aa	Known RBP	4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	RASA3	Q14644	834 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	GAGE13	Q4V321	117 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	FAM47C	Q5HY64	1035 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	MBNL2	Q5VZF2	373 aa	Known RBP	4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	LRP10	Q7Z4F1	713 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	NPM2	Q86SE8	214 aa	Known RBP	4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	GSPT2	Q8IYD1	628 aa	Known RBP	4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	CALML6	Q8TD86	181 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	NTN5	Q8WTR8	489 aa	Predicted RBP	4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	UBE2Q2	Q8WVN8	375 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	GFM2	Q969S9	779 aa	Known RBP	4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	NAF1	Q96HR8	494 aa	Known RBP	4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	DNAJC7	Q99615	494 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	DHRS4	Q9BTZ2	278 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	KCNH7	Q9NS40	1196 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	PCDHA8	Q9Y5H6	950 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	SMARCA2	P51531	1590 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	ABCC8	Q09428	1581 aa		4.56	□□□□□ -1.68
CSMD3-209	ENST00000519485	CCDC66	A2RUB6	948 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	KLRG2	A4D1S0	409 aa	Predicted RBP	4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	GOLGA6L22	H0YM25	854 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	ADCY3	O60266	1144 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	H2AFY	O75367	372 aa	Known RBP	4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	MRPS21	P82921	87 aa	Known RBP	4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	ATP2C1	P98194	919 aa	Predicted RBP	4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	GUCY1A3	Q02108	690 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	FSTL1	Q12841	308 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	DDX10	Q13206	875 aa	Known RBP	4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	ADAM15	Q13444	863 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	SERINC3	Q13530	473 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	CSRP2	Q16527	193 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	RABL3	Q5HYI8	236 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	FOXB2	Q5VYV0	432 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	NAIF1	Q69YI7	327 aa	Predicted RBP	4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	FAM111B	Q6SJ93	734 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	DLG3	Q92796	817 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	GPHA2	Q96T91	129 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	FZD1	Q9UP38	647 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	HS3ST4	Q9Y661	456 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	SETD5	Q9C0A6	1442 aa		4.55	□□□□□ -1.68
CSMD3-209	ENST00000519485	RASSF10	A6NK89	507 aa		4.54	□□□□□ -1.68
CSMD3-209	ENST00000519485	GRXCR1	A8MXD5	290 aa		4.54	□□□□□ -1.68
CSMD3-209	ENST00000519485	FOXP2	O15409	715 aa		4.54	□□□□□ -1.68
CSMD3-209	ENST00000519485	SRGAP2C	P0DJJ0	459 aa		4.54	□□□□□ -1.68
CSMD3-209	ENST00000519485	KRTAP10-11	P60412	298 aa		4.54	□□□□□ -1.68
CSMD3-209	ENST00000519485	GABRE	P78334	506 aa		4.54	□□□□□ -1.68
CSMD3-209	ENST00000519485	ELAVL1	Q15717	326 aa	Known RBP	4.54	□□□□□ -1.68
CSMD3-209	ENST00000519485	LONRF2	Q1L5Z9	754 aa		4.54	□□□□□ -1.68
CSMD3-209	ENST00000519485	COLEC12	Q5KU26	742 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms