RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 HERVK_113Q902F9 699 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 DYDC2Q96IM9 177 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 LXNQ9BS40 222 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 TNMDQ9H2S6 317 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 WRAP73Q9P2S5 460 aaPredicted RBP8.46□□□□□ -1.06
SDCBP-206ENST00000519115 CCDC39Q9UFE4 941 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 PCDHA12Q9UN75 941 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 PCDHA2Q9Y5H9 948 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 CDY2AQ9Y6F7 541 aa8.46□□□□□ -1.06
SDCBP-206ENST00000519115 TCHHQ07283 1943 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 FSD2A1L4K1 749 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 GRXCR1A8MXD5 290 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 CAND2O75155 1236 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 STBD1O95210 358 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 VTNP04004 478 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 P4HBP07237 508 aaKnown RBP8.45□□□□□ -1.06
SDCBP-206ENST00000519115 GHRP10912 638 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 ACTN1P12814 892 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 PFKFB1P16118 471 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 QARSP47897 775 aaKnown RBP8.45□□□□□ -1.06
SDCBP-206ENST00000519115 MRE11P49959 708 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 PSMC5P62195 406 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 MRPS6P82932 125 aaKnown RBP8.45□□□□□ -1.06
SDCBP-206ENST00000519115 AMPD3Q01432 767 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 EPHA7Q15375 998 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 UVSSAQ2YD98 709 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 XKR3Q5GH77 459 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 RASIP1Q5U651 963 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 CNNM4Q6P4Q7 775 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 KRBA2Q6ZNG9 492 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 RSPH3Q86UC2 560 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 CHAMP1Q96JM3 812 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 EIF2AK1Q9BQI3 630 aaKnown RBP8.45□□□□□ -1.06
SDCBP-206ENST00000519115 NT5C3AQ9H0P0 336 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 CSRNP2Q9H175 543 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 MTIF3Q9H2K0 278 aaKnown RBP8.45□□□□□ -1.06
SDCBP-206ENST00000519115 NRBP2Q9NSY0 501 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 KIAA1468Q9P260 1216 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 GINS2Q9Y248 185 aa8.45□□□□□ -1.06
SDCBP-206ENST00000519115 MYH11P35749 1972 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 TTC3P53804 2025 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 A0A087WWV3 80 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 A0A1B0GVL5 298 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 SMIM35A0A1B0GVV1 85 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 M0QZ92 97 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 ZBTB39O15060 712 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 SMC2O95347 1197 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 PARNO95453 639 aaKnown RBP8.44□□□□□ -1.06
SDCBP-206ENST00000519115 CXCL10P02778 98 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 XRCC6P12956 609 aaKnown RBP eCLIP8.44□□□□□ -1.06
SDCBP-206ENST00000519115 TECP42680 631 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 NPEPPSP55786 919 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 DEFB103AP81534 67 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 MGAT3Q09327 533 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 TBC1D8BQ0IIM8 1120 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 TARBP2Q15633 366 aaKnown RBP8.44□□□□□ -1.06
SDCBP-206ENST00000519115 PLEKHG4Q58EX7 1191 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 FAM26DQ5JW98 314 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 FBXO47Q5MNV8 452 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 L1TD1Q5T7N2 865 aaKnown RBP8.44□□□□□ -1.06
SDCBP-206ENST00000519115 EFCAB12Q6NXP0 572 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 CNKSR3Q6P9H4 555 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 ANO5Q75V66 913 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 RPAINQ86UA6 219 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 TPH2Q8IWU9 490 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 KIAA0319LQ8IZA0 1049 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 DBF4BQ8NFT6 615 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 ERMNQ8TAM6 284 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 ZNF668Q96K58 619 aaPredicted RBP8.44□□□□□ -1.06
SDCBP-206ENST00000519115 GSDMAQ96QA5 445 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 FUCA2Q9BTY2 467 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 NAT10Q9H0A0 1025 aaKnown RBP8.44□□□□□ -1.06
SDCBP-206ENST00000519115 SUGCTQ9HAC7 445 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 BMP2KQ9NSY1 1161 aaPredicted RBP8.44□□□□□ -1.06
SDCBP-206ENST00000519115 STK17AQ9UEE5 414 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 AKT3Q9Y243 479 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 TRPV2Q9Y5S1 764 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 SLC4A7Q9Y6M7 1214 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 NLRC5Q86WI3 1866 aa8.44□□□□□ -1.06
SDCBP-206ENST00000519115 VWA3AA6NCI4 1184 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 GOLGA6L3A6NEY3 463 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 MAGEB2O15479 319 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 POLR2DO15514 142 aaKnown RBP8.43□□□□□ -1.06
SDCBP-206ENST00000519115 ATP2A2P16615 1042 aaKnown RBP8.43□□□□□ -1.06
SDCBP-206ENST00000519115 YWHABP31946 246 aaKnown RBP8.43□□□□□ -1.06
SDCBP-206ENST00000519115 PBX2P40425 430 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 PPP1R2P41236 205 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 KCNJ6P48051 423 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 SARSP49591 514 aaKnown RBP8.43□□□□□ -1.06
SDCBP-206ENST00000519115 RABGGTBP53611 331 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 WDR5P61964 334 aaKnown RBP8.43□□□□□ -1.06
SDCBP-206ENST00000519115 DRP2Q13474 957 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 LPIN1Q14693 890 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 E2F4Q16254 413 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 IL17AQ16552 155 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 KIZQ2M2Z5 673 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 XKR9Q5GH70 373 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 IER5Q5VY09 327 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 KRT79Q5XKE5 535 aa8.43□□□□□ -1.06
SDCBP-206ENST00000519115 SASS6Q6UVJ0 657 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms