RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 CLIC2O15247 247 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 MAFGO15525 162 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 EXOC3O60645 756 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 CTAGE8P0CG41 777 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 MAPTP10636 758 aaKnown RBP11.78□□□□□ -0.52
SPIDR-204ENST00000517824 YWHABP31946 246 aaKnown RBP11.78□□□□□ -0.52
SPIDR-204ENST00000517824 ZNF131P52739 623 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 SMTNP53814 917 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 MYL7Q01449 175 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 KLHL30Q0D2K2 578 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 DMP1Q13316 513 aaPredicted RBP11.78□□□□□ -0.52
SPIDR-204ENST00000517824 ITGB3BPQ13352 177 aaPredicted RBP11.78□□□□□ -0.52
SPIDR-204ENST00000517824 NFIL3Q16649 462 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 ERCC6LQ2NKX8 1250 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 WDR59Q6PJI9 974 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 ZNF662Q6ZS27 426 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 CTAGE6Q86UF2 777 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 CTAGE4Q8IX94 777 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 SMAP1Q8IYB5 467 aaPredicted RBP11.78□□□□□ -0.52
SPIDR-204ENST00000517824 C2orf69Q8N8R5 385 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 CRACR2AQ9BSW2 395 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.78□□□□□ -0.52
SPIDR-204ENST00000517824 CCDC94Q9BW85 323 aaPredicted RBP11.78□□□□□ -0.52
SPIDR-204ENST00000517824 ANKEF1Q9NU02 776 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 PCDHA13Q9Y5I0 950 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 MCM3APO60318 1980 aa11.78□□□□□ -0.52
SPIDR-204ENST00000517824 ANO9A1A5B4 782 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 H0YCG3 227 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 TULP1O00294 542 aaPredicted RBP11.77□□□□□ -0.53
SPIDR-204ENST00000517824 BACH1O14867 736 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 LYPLA2O95372 231 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 NR3C2P08235 984 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 CCDC172P0C7W6 258 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 PLS3P13797 630 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 ABCD1P33897 745 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 ARHGAP25P42331 645 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 MAGEA1P43355 309 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 ZNF157P51786 506 aaPredicted RBP11.77□□□□□ -0.53
SPIDR-204ENST00000517824 MRPS9P82933 396 aaKnown RBP11.77□□□□□ -0.53
SPIDR-204ENST00000517824 ARID5AQ03989 594 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 FAM102BQ5T8I3 360 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 MIS18BP1Q6P0N0 1132 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 TMCO3Q6UWJ1 677 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 CATSPERGQ6ZRH7 1159 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 MAEAQ7L5Y9 396 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 SRGAP1Q7Z6B7 1085 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 C4orf19Q8IY42 314 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 ANKRD35Q8N283 1001 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 CHST13Q8NET6 341 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 TRIM58Q8NG06 486 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 RABGGTAQ92696 567 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 CCDC102AQ96A19 550 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 HVCN1Q96D96 273 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 JPH1Q9HDC5 661 aaPredicted RBP11.77□□□□□ -0.53
SPIDR-204ENST00000517824 PLCB1Q9NQ66 1216 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 MYO6Q9UM54 1294 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 DAAM1Q9Y4D1 1078 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 BZW2Q9Y6E2 419 aaKnown RBP11.77□□□□□ -0.53
SPIDR-204ENST00000517824 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.53
SPIDR-204ENST00000517824 GTPBP10A4D1E9 387 aaKnown RBP11.76□□□□□ -0.53
SPIDR-204ENST00000517824 CCDC169A6NNP5 214 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 ATP2A1O14983 1001 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 ERLIN1O75477 346 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 SLC10A3P09131 477 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 COPB2P35606 906 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 RARRES1P49788 294 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 CYP27A1Q02318 531 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 SP4Q02446 784 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 VGLL4Q14135 290 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 PPP2R5AQ15172 486 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 ENOX2Q16206 610 aaKnown RBP11.76□□□□□ -0.53
SPIDR-204ENST00000517824 IFI16Q16666 785 aaKnown RBP11.76□□□□□ -0.53
SPIDR-204ENST00000517824 ZC2HC1CQ53FD0 456 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-204ENST00000517824 B3GNT9Q6UX72 402 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 ZNF720Q7Z2F6 126 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 USP37Q86T82 979 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 GPR161Q8N6U8 529 aaKnown RBP11.76□□□□□ -0.53
SPIDR-204ENST00000517824 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.76□□□□□ -0.53
SPIDR-204ENST00000517824 BAP1Q92560 729 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 KIFAP3Q92845 792 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 CDCA5Q96FF9 252 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 IFT74Q96LB3 600 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 NOX5Q96PH1 765 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 MOV10L1Q9BXT6 1211 aaKnown RBP11.76□□□□□ -0.53
SPIDR-204ENST00000517824 IRX2Q9BZI1 471 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-204ENST00000517824 AGPAT3Q9NRZ7 376 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 RNF186Q9NXI6 227 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 SAGE1Q9NXZ1 904 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-204ENST00000517824 PUF60Q9UHX1 559 aaKnown RBP11.76□□□□□ -0.53
SPIDR-204ENST00000517824 REXO2Q9Y3B8 237 aaKnown RBP11.76□□□□□ -0.53
SPIDR-204ENST00000517824 PCDHA10Q9Y5I2 948 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 NFASCO94856 1347 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 PDE4DIPQ5VU43 2346 aa11.76□□□□□ -0.53
SPIDR-204ENST00000517824 SPDYE16A6NNV3 312 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-204ENST00000517824 EPHB6O15197 1021 aa11.75□□□□□ -0.53
SPIDR-204ENST00000517824 TRPA1O75762 1119 aa11.75□□□□□ -0.53
SPIDR-204ENST00000517824 AKAP3O75969 853 aa11.75□□□□□ -0.53
SPIDR-204ENST00000517824 FERP16591 822 aa11.75□□□□□ -0.53
SPIDR-204ENST00000517824 RFX1P22670 979 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms