RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 RTP3Q9BQQ7 232 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 SEMA4AQ9H3S1 761 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 RIC8AQ9NPQ8 531 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 RNF19AQ9NV58 838 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 IRAK3Q9Y616 596 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 TAF6LQ9Y6J9 622 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 DDX39AO00148 427 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 MAGEB2O15479 319 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 PRC1O43663 620 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 VTNP04004 478 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 EIF4BP23588 611 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 TMOD1P28289 359 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 ZNF76P36508 570 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 LIFRP42702 1097 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 NAPAP54920 295 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 AP3B2Q13367 1082 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 ANGPT1Q15389 498 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 CLLU1OSQ5K130 101 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 TMTC3Q6ZXV5 915 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 OTOP3Q7RTS5 596 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 ECHDC2Q86YB7 292 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 RNF169Q8NCN4 708 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 ANO3Q9BYT9 981 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 ZBP1Q9H171 429 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 GLT8D2Q9H1C3 349 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 DACT1Q9NYF0 836 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 SLC12A7Q9Y666 1083 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 WDR81Q562E7 1941 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 DMXL1Q9Y485 3027 aa13.01□□□□□ -0.33
TRAPPC9-203ENST00000517667 A0A0U1RQF3 1178 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 hCG_1642624A0A1W2PR95 340 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 hCG_1984214I3L0E3 225 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 SH2B2O14492 632 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-203ENST00000517667 CXCL14O95715 111 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 WEE2P0C1S8 567 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 RXRAP19793 462 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 CHMLP26374 656 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 SREBF1P36956 1147 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 ADCY7P51828 1080 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 POLGP54098 1239 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-203ENST00000517667 NLRP11P59045 1033 aaKnown RBP13□□□□□ -0.33
TRAPPC9-203ENST00000517667 TDGQ13569 410 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 TTC22Q5TAA0 569 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 SWSAP1Q6NVH7 229 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 CCDC149Q6ZUS6 474 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 CABP7Q86V35 215 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 PPFIBP1Q86W92 1011 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 SMAP1Q8IYB5 467 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-203ENST00000517667 VPS52Q8N1B4 723 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 CCDC82Q8N4S0 544 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 ZNF713Q8N859 430 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-203ENST00000517667 FANCBQ8NB91 859 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 HELQQ8TDG4 1101 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 FAM167AQ96KS9 214 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 SFXN1Q9H9B4 322 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 STK39Q9UEW8 545 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 TCEAL9Q9UHQ7 104 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 FBXL21Q9UKT6 434 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 DUSP12Q9UNI6 340 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 AKT3Q9Y243 479 aa13□□□□□ -0.33
TRAPPC9-203ENST00000517667 MAFBQ9Y5Q3 323 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-203ENST00000517667 IPO5O00410 1097 aaKnown RBP12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 SGSM2O43147 1006 aa12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 IGHDP01880 384 aa12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 CTSAP10619 480 aa12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 ATP4AP20648 1035 aa12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 METAP2P50579 478 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 BCAR1P56945 870 aa12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 WWC2Q6AWC2 1192 aa12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 ZNF746Q6NUN9 644 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 DDX53Q86TM3 631 aaKnown RBP12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 C12orf76Q8N812 135 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 DTWD2Q8NBA8 298 aa12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 MAP4K1Q92918 833 aa12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 PGBD1Q96JS3 809 aa12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 TBC1D22BQ9NU19 505 aa12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 C2orf16Q68DN1 1984 aa12.99□□□□□ -0.33
TRAPPC9-203ENST00000517667 CNTNAP5Q8WYK1 1306 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 DHX15O43143 795 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 ZC3H11AO75152 810 aaKnown RBP eCLIP12.98□□□□□ -0.334e-6■■■■□ 23.4
TRAPPC9-203ENST00000517667 LMNAP02545 664 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 PSAPP07602 524 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 GSPT1P15170 499 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 EPCAMP16422 314 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 NPR3P17342 541 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 CLCN3P51790 818 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 SETQ01105 290 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 EFCAB12Q6NXP0 572 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 GPR149Q86SP6 731 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 ZNF598Q86UK7 904 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 MICU3Q86XE3 530 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 PLA2G4DQ86XP0 818 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 SIX5Q8N196 739 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 KCNG4Q8TDN1 519 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 SCLT1Q96NL6 688 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 ADAMTS10Q9H324 1103 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 KCNK12Q9HB15 430 aa12.98□□□□□ -0.33
TRAPPC9-203ENST00000517667 RBM28Q9NW13 759 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms