RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 CEP170P1Q96L14 293 aa27.55■■■□□ 2
PVT1-204ENST00000517525 ADAM2Q99965 735 aa27.55■■■□□ 2
PVT1-204ENST00000517525 ELAC1Q9H777 363 aaKnown RBP27.55■■■□□ 2
PVT1-204ENST00000517525 ANKEF1Q9NU02 776 aa27.55■■■□□ 2
PVT1-204ENST00000517525 SUCLA2Q9P2R7 463 aaPredicted RBP27.55■■■□□ 2
PVT1-204ENST00000517525 NOL7Q9UMY1 257 aaKnown RBP27.55■■■□□ 2
PVT1-204ENST00000517525 PRRC2BQ5JSZ5 2229 aaKnown RBP27.55■■■□□ 2
PVT1-204ENST00000517525 C5orf67F2Z3F1 127 aa27.54■■■□□ 2
PVT1-204ENST00000517525 RB1P06400 928 aa27.54■■■□□ 2
PVT1-204ENST00000517525 GNL2Q13823 731 aaKnown RBP27.54■■■□□ 2
PVT1-204ENST00000517525 CTTNQ14247 550 aaKnown RBP27.54■■■□□ 2
PVT1-204ENST00000517525 TTC38Q5R3I4 469 aa27.54■■■□□ 2
PVT1-204ENST00000517525 LOXHD1Q8IVV2 1947 aa27.54■■■□□ 2
PVT1-204ENST00000517525 TMEM192Q8IY95 271 aa27.54■■■□□ 2
PVT1-204ENST00000517525 FBXO22Q8NEZ5 403 aa27.54■■■□□ 2
PVT1-204ENST00000517525 PPP1R16BQ96T49 567 aa27.54■■■□□ 2
PVT1-204ENST00000517525 SH2D3AQ9BRG2 576 aa27.54■■■□□ 2
PVT1-204ENST00000517525 GCOM2Q9BZD3 368 aaPredicted RBP27.54■■■□□ 2
PVT1-204ENST00000517525 TRANK1O15050 2925 aa27.53■■■□□ 2
PVT1-204ENST00000517525 DENND3A2RUS2 1198 aa27.53■■■□□ 2
PVT1-204ENST00000517525 ATP2B1P20020 1258 aa27.53■■■□□ 2
PVT1-204ENST00000517525 CYP4A11Q02928 519 aa27.53■■■□□ 2
PVT1-204ENST00000517525 ZNF174Q15697 407 aa27.53■■■□□ 2
PVT1-204ENST00000517525 TPH2Q8IWU9 490 aa27.53■■■□□ 2
PVT1-204ENST00000517525 C4orf32Q8N8J7 132 aa27.53■■■□□ 2
PVT1-204ENST00000517525 ZNF579Q8NAF0 562 aaKnown RBP27.53■■■□□ 2
PVT1-204ENST00000517525 H3BNC9 293 aa27.52■■■□□ 2
PVT1-204ENST00000517525 OR52Z1P0C646 297 aa27.52■■■□□ 2
PVT1-204ENST00000517525 GDPD5Q8WTR4 605 aa27.52■■■□□ 2
PVT1-204ENST00000517525 NLRP7Q8WX94 980 aa27.52■■■□□ 2
PVT1-204ENST00000517525 INO80BQ9C086 356 aaPredicted RBP27.52■■■□□ 2
PVT1-204ENST00000517525 TUFT1Q9NNX1 390 aa27.52■■■□□ 2
PVT1-204ENST00000517525 MTUS1Q9ULD2 1270 aa27.52■■■□□ 2
PVT1-204ENST00000517525 BMPR1AP36894 532 aa27.51■■□□□ 1.99
PVT1-204ENST00000517525 TOB1P50616 345 aaPredicted RBP27.51■■□□□ 1.99
PVT1-204ENST00000517525 POLGP54098 1239 aaPredicted RBP27.51■■□□□ 1.99
PVT1-204ENST00000517525 BTG3Q14201 252 aaPredicted RBP27.51■■□□□ 1.99
PVT1-204ENST00000517525 TCP11Q8WWU5 503 aa27.51■■□□□ 1.99
PVT1-204ENST00000517525 POLR3CQ9BUI4 534 aaPredicted RBP27.51■■□□□ 1.99
PVT1-204ENST00000517525 CHST12Q9NRB3 414 aa27.51■■□□□ 1.99
PVT1-204ENST00000517525 TMEM161AQ9NX61 479 aa27.51■■□□□ 1.99
PVT1-204ENST00000517525 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.51■■□□□ 1.99
PVT1-204ENST00000517525 PCDHB7Q9Y5E2 793 aa27.51■■□□□ 1.99
PVT1-204ENST00000517525 ASAP2O43150 1006 aa27.5■■□□□ 1.99
PVT1-204ENST00000517525 SPATA31C1P0DKV0 1188 aa27.5■■□□□ 1.99
PVT1-204ENST00000517525 GJB2P29033 226 aa27.5■■□□□ 1.99
PVT1-204ENST00000517525 XKR9Q5GH70 373 aa27.5■■□□□ 1.99
PVT1-204ENST00000517525 RHPN2Q8IUC4 686 aa27.5■■□□□ 1.99
PVT1-204ENST00000517525 TRAIPQ9BWF2 469 aa27.5■■□□□ 1.99
PVT1-204ENST00000517525 PLVAPQ9BX97 442 aa27.5■■□□□ 1.99
PVT1-204ENST00000517525 LRFN2Q9ULH4 789 aa27.5■■□□□ 1.99
PVT1-204ENST00000517525 A0A087WZ62 844 aa27.49■■□□□ 1.99
PVT1-204ENST00000517525 POTEMA6NI47 508 aa27.49■■□□□ 1.99
PVT1-204ENST00000517525 ZBTB39O15060 712 aa27.49■■□□□ 1.99
PVT1-204ENST00000517525 ZSCAN20P17040 1043 aaPredicted RBP27.49■■□□□ 1.99
PVT1-204ENST00000517525 MUTP22033 750 aa27.49■■□□□ 1.99
PVT1-204ENST00000517525 FXR2P51116 673 aaKnown RBP eCLIP27.49■■□□□ 1.99
PVT1-204ENST00000517525 CUL4AQ13619 759 aa27.49■■□□□ 1.99
PVT1-204ENST00000517525 PSPC1Q8WXF1 523 aaKnown RBP27.49■■□□□ 1.99
PVT1-204ENST00000517525 SCLT1Q96NL6 688 aa27.49■■□□□ 1.99
PVT1-204ENST00000517525 FDXACB1Q9BRP7 624 aaPredicted RBP27.49■■□□□ 1.99
PVT1-204ENST00000517525 IFT122Q9HBG6 1241 aa27.49■■□□□ 1.99
PVT1-204ENST00000517525 COL4A3BPQ9Y5P4 624 aa27.49■■□□□ 1.99
PVT1-204ENST00000517525 LAD1O00515 517 aa27.48■■□□□ 1.99
PVT1-204ENST00000517525 DGAT1O75907 488 aa27.48■■□□□ 1.99
PVT1-204ENST00000517525 EMC2Q15006 297 aa27.48■■□□□ 1.99
PVT1-204ENST00000517525 CCDC85BQ15834 202 aaPredicted RBP27.48■■□□□ 1.99
PVT1-204ENST00000517525 NAALADL2Q58DX5 795 aa27.48■■□□□ 1.99
PVT1-204ENST00000517525 ATXN2LQ8WWM7 1075 aaKnown RBP27.48■■□□□ 1.99
PVT1-204ENST00000517525 PRPF31Q8WWY3 499 aaKnown RBP27.48■■□□□ 1.99
PVT1-204ENST00000517525 PPM1EQ8WY54 764 aa27.48■■□□□ 1.99
PVT1-204ENST00000517525 MRPL38Q96DV4 380 aaKnown RBP27.48■■□□□ 1.99
PVT1-204ENST00000517525 DACT1Q9NYF0 836 aa27.48■■□□□ 1.99
PVT1-204ENST00000517525 SMC3Q9UQE7 1217 aa27.48■■□□□ 1.99
PVT1-204ENST00000517525 SFPQP23246 707 aaKnown RBP eCLIP27.47■■□□□ 1.994e-6■■□□□ 12.8
PVT1-204ENST00000517525 RPA1P27694 616 aa27.47■■□□□ 1.99
PVT1-204ENST00000517525 TECP42680 631 aa27.47■■□□□ 1.99
PVT1-204ENST00000517525 RARRES1P49788 294 aa27.47■■□□□ 1.99
PVT1-204ENST00000517525 POU5F1BQ06416 359 aa27.47■■□□□ 1.99
PVT1-204ENST00000517525 GPM6BQ13491 265 aa27.47■■□□□ 1.99
PVT1-204ENST00000517525 PDIA5Q14554 519 aa27.47■■□□□ 1.99
PVT1-204ENST00000517525 PTPROQ16827 1216 aa27.47■■□□□ 1.99
PVT1-204ENST00000517525 CATSPER3Q86XQ3 398 aa27.47■■□□□ 1.99
PVT1-204ENST00000517525 ERMNQ8TAM6 284 aa27.47■■□□□ 1.99
PVT1-204ENST00000517525 P2RX5Q93086 422 aa27.47■■□□□ 1.99
PVT1-204ENST00000517525 ZNF668Q96K58 619 aaPredicted RBP27.47■■□□□ 1.99
PVT1-204ENST00000517525 C11orf84Q9BUA3 381 aaPredicted RBP27.47■■□□□ 1.99
PVT1-204ENST00000517525 ATP6V0A4Q9HBG4 840 aa27.47■■□□□ 1.99
PVT1-204ENST00000517525 XPNPEP1Q9NQW7 623 aa27.47■■□□□ 1.99
PVT1-204ENST00000517525 DBR1Q9UK59 544 aaKnown RBP27.47■■□□□ 1.99
PVT1-204ENST00000517525 A0A0U1RQF3 1178 aa27.46■■□□□ 1.99
PVT1-204ENST00000517525 LAMTOR4Q0VGL1 99 aa27.46■■□□□ 1.99
PVT1-204ENST00000517525 RILPL1Q5EBL4 403 aa27.46■■□□□ 1.99
PVT1-204ENST00000517525 SRGAP1Q7Z6B7 1085 aa27.46■■□□□ 1.99
PVT1-204ENST00000517525 FERMT3Q86UX7 667 aa27.46■■□□□ 1.99
PVT1-204ENST00000517525 TMEM143Q96AN5 459 aa27.46■■□□□ 1.99
PVT1-204ENST00000517525 MTRQ99707 1265 aa27.46■■□□□ 1.99
PVT1-204ENST00000517525 LMAN2LQ9H0V9 348 aa27.46■■□□□ 1.99
PVT1-204ENST00000517525 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.46■■□□□ 1.99
PVT1-204ENST00000517525 THEGQ9P2T0 379 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms