RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 APTXQ7Z2E3 356 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 NSUN4Q96CB9 384 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 PNMA2Q9UL42 364 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 AKT3Q9Y243 479 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 LMO7Q8WWI1 1683 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 RAD51CO43502 376 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 POLR2BP30876 1174 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 PPP2R2AP63151 447 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 HDLBPQ00341 1268 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 PTGISQ16647 500 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 C10orf76Q5T2E6 689 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 HIBCHQ6NVY1 386 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 CREG2Q8IUH2 290 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 FMO2Q99518 471 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 RIOK1Q9BRS2 568 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 MED10Q9BTT4 135 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 SPC25Q9HBM1 224 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 INTS9Q9NV88 658 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 FBXL5Q9UKA1 691 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 DAAM1Q9Y4D1 1078 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 POTEB3A0JP26 581 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 MYMKA6NI61 221 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 POTECB2RU33 542 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 TDP2O95551 362 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 CDK17Q00537 523 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 PPP2R5EQ16537 467 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 LGSNQ5TDP6 509 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 FAM160B1Q5W0V3 765 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 POTEBQ6S5H4 581 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZBTB33Q86T24 672 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 CLEC10AQ8IUN9 316 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 STMN2Q93045 179 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 ATRNO75882 1429 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 BAZ2BQ9UIF8 2168 aaKnown RBP11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 SRGAP2CP0DJJ0 459 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 PRLRP16471 622 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 CD58P19256 250 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 KDM7AQ6ZMT4 941 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 TSEN2Q8NCE0 465 aaKnown RBP11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 ARHGEF2Q92974 986 aaKnown RBP11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 DUSP9Q99956 384 aaKnown RBP11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 EDEM3Q9BZQ6 932 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 CNOT10Q9H9A5 744 aaKnown RBP11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 STK38LQ9Y2H1 464 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 CCDC188H7C350 402 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 STXBP3O00186 592 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 AKR1B1P15121 316 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 MARK3P27448 753 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 MAPK4P31152 587 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 PPP2R5AQ15172 486 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 TTBK2Q6IQ55 1244 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZNF507Q8TCN5 953 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 FAM149B1Q96BN6 582 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 FGGP02679 453 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 KLRC1P26715 233 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 ARHGAP4P98171 946 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 FIGNQ5HY92 759 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 ANKRD20A3Q5VUR7 823 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 CASKIN2Q8WXE0 1202 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 HOMER3Q9NSC5 361 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 SLC5A4Q9NY91 659 aa11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 PHRF1Q9P1Y6 1649 aaKnown RBP11.67□□□□□ -0.54
PCDHGA1-202ENST00000517417 ECE2O60344 883 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 BPIFB4P59827 614 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 ATP11AP98196 1134 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 IL17AQ16552 155 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 QRICH1Q2TAL8 776 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 FAM133BQ5BKY9 247 aaKnown RBP11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 DALRD3Q5D0E6 543 aaKnown RBP11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 SDCCAG8Q86SQ7 713 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 C7orf31Q8N865 590 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 TACO1Q9BSH4 297 aaKnown RBP11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 TMEM206Q9H813 350 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 NOC2LQ9Y3T9 749 aaKnown RBP11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 GLI1P08151 1106 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 BRD2P25440 801 aaKnown RBP11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 SLCO1A2P46721 670 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 KCNH2Q12809 1159 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 SLC18A3Q16572 532 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 TMED8Q6PL24 325 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 SFR1Q86XK3 245 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 TRIM50Q86XT4 487 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 BANK1Q8NDB2 785 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 MCUR1Q96AQ8 359 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 RMDN3Q96TC7 470 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 SEMA6BQ9H3T3 888 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 CAMTA1Q9Y6Y1 1673 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 POTEFA5A3E0 1075 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZSCAN5CA6NGD5 496 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 POTEIP0CG38 1075 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 ATF2P15336 505 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 POTEGQ6S5H5 508 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 POTEEQ6S8J3 1075 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 FAM160B2Q86V87 743 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 DDX42Q86XP3 938 aaKnown RBP eCLIP11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 HACE1Q8IYU2 909 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 CAVIN3Q969G5 261 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 CXorf56Q9H5V9 222 aa11.66□□□□□ -0.54
PCDHGA1-202ENST00000517417 RAVER2Q9HCJ3 691 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms