RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 LONRF3Q496Y0 759 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 PLPP4Q5VZY2 271 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 EFCAB12Q6NXP0 572 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ANKRD54Q6NXT1 300 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 LLGL2Q6P1M3 1020 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 KCNT2Q6UVM3 1135 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 BMP8AQ7Z5Y6 402 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ECHDC2Q86YB7 292 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 METTL13Q8N6R0 699 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ZNF577Q9BSK1 485 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 TLR9Q9NR96 1032 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 FAM86C1Q9NVL1 165 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 TMEM161AQ9NX61 479 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 RWDD3Q9Y3V2 267 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 PCDHB7Q9Y5E2 793 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 NCOR2Q9Y618 2525 aa9.39□□□□□ -0.91
SCARNA20.3-201ENST00000516913 COL1A2P08123 1366 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 MYO10Q9HD67 2058 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 C2orf71A6NGG8 1288 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ZBTB39O15060 712 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 STAG3L1P0CL83 205 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 DARSP14868 501 aaKnown RBP9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 EIF4BP23588 611 aaKnown RBP9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 HSPA4P34932 840 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ZNF76P36508 570 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 SLC26A2P50443 739 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 EVCP57679 992 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 CCT2P78371 535 aaKnown RBP9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 PLCB3Q01970 1234 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 EARS2Q5JPH6 523 aaKnown RBP9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ZNF746Q6NUN9 644 aaPredicted RBP9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 MIS18BP1Q6P0N0 1132 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 SLC39A11Q8N1S5 342 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 HELQQ8TDG4 1101 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 BBXQ8WY36 941 aaPredicted RBP9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 JAKMIP1Q96N16 626 aaKnown RBP9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 MBOAT7Q96N66 472 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 PHF7Q9BWX1 381 aaPredicted RBP9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 TMEM117Q9H0C3 514 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 MINDY3Q9H8M7 445 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 DISC1Q9NRI5 854 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 PCDHA10Q9Y5I2 948 aa9.38□□□□□ -0.91
SCARNA20.3-201ENST00000516913 DENND3A2RUS2 1198 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 FAM205CA6NFA0 338 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 C2CD4DB7Z1M9 353 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 F8W810 466 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 WNT7AO00755 349 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 CHMP2AO43633 222 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 SLC37A4O43826 429 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 CLASP2O75122 1294 aaKnown RBP9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 BRD1O95696 1058 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 RPS6KB1P23443 525 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 TECP42680 631 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 METAP2P50579 478 aaKnown RBP eCLIP9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 PRKCEQ02156 737 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 FAM160B1Q5W0V3 765 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ANO5Q75V66 913 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ZNF280BQ86YH2 543 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 REXO1Q8N1G1 1221 aaKnown RBP9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 FBXL16Q8N461 479 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 MRPL43Q8N983 215 aaKnown RBP9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ETNPPLQ8TBG4 499 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 MICAL1Q8TDZ2 1067 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 MRPS27Q92552 414 aaKnown RBP9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 PBXIP1Q96AQ6 731 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 TCF25Q9BQ70 676 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 POMKQ9H5K3 350 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ELAC1Q9H777 363 aaKnown RBP9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ATP6V0A4Q9HBG4 840 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 DNAJB4Q9UDY4 337 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 LRFN2Q9ULH4 789 aa9.37□□□□□ -0.91
SCARNA20.3-201ENST00000516913 CYP3A7-CYP3A51PA0A087WV96 503 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 A0A087WZ62 844 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 A0A0U1RQF3 1178 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 hCG_1984214I3L0E3 225 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 GPR182O15218 404 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 LILRB3O75022 631 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 OATP04181 439 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ASGR2P07307 311 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 EPCAMP16422 314 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 IFNAR1P17181 557 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 CYP3A7P24462 503 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 HOXA11P31270 313 aaPredicted RBP9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 RCAN1P53805 252 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 NPEPPSP55786 919 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 UBE3AQ05086 875 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 UBXN11Q5T124 520 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 PLA2G4FQ68DD2 849 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 TAS1R1Q7RTX1 841 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 THNSL1Q8IYQ7 743 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 ZNF713Q8N859 430 aaPredicted RBP9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 RNF169Q8NCN4 708 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 OXER1Q8TDS5 423 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 TBCKQ8TEA7 893 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 SLC22A17Q8WUG5 538 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 CCDC136Q96JN2 1154 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 FDXACB1Q9BRP7 624 aaPredicted RBP9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 SLC26A6Q9BXS9 759 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 RNF39Q9H2S5 420 aa9.36□□□□□ -0.91
SCARNA20.3-201ENST00000516913 IFT122Q9HBG6 1241 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms